Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRBV20-1A0A075B6N2 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC12.36□□□□□ -0.43
TRBV20-1A0A075B6N2 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRBV20-1A0A075B6N2 FLJ13224-201ENST00000313737 1514 ntBASIC12.36□□□□□ -0.43
TRBV20-1A0A075B6N2 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRBV20-1A0A075B6N2 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRBV20-1A0A075B6N2 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC12.36□□□□□ -0.43
TRBV20-1A0A075B6N2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRBV20-1A0A075B6N2 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRBV20-1A0A075B6N2 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRBV20-1A0A075B6N2 C8orf49-201ENST00000525043 1968 ntBASIC12.36□□□□□ -0.43
TRBV20-1A0A075B6N2 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRBV20-1A0A075B6N2 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRBV20-1A0A075B6N2 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRBV20-1A0A075B6N2 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV20-1A0A075B6N2 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 AGK-211ENST00000629555 2765 ntTSL 5 BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 DUX4L18-201ENST00000553347 1267 ntBASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 AC023824.1-201ENST00000562945 2975 ntBASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 KRT8P17-201ENST00000453110 1448 ntBASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 FRMD6-AS1-201ENST00000617151 2229 ntBASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 BANP-201ENST00000286122 2368 ntTSL 5 BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV20-1A0A075B6N2 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms