Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCA3PQ9Y6N3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCA3PQ9Y6N3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCA3PQ9Y6N3 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCA3PQ9Y6N3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.51■□□□□ 0.39
CLCA3PQ9Y6N3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCA3PQ9Y6N3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 AC008556.1-201ENST00000610908 2040 ntBASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 AC036111.1-201ENST00000533973 1582 ntBASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 AC073508.3-201ENST00000619697 1419 ntBASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 AP000523.1-201ENST00000398242 1049 ntBASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 BX664615.1-201ENST00000443558 458 ntBASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 WWOX-216ENST00000569818 525 ntBASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 RN7SL850P-201ENST00000579959 291 ntBASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
CLCA3PQ9Y6N3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLCA3PQ9Y6N3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCA3PQ9Y6N3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCA3PQ9Y6N3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLCA3PQ9Y6N3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLCA3PQ9Y6N3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.49■□□□□ 0.39
CLCA3PQ9Y6N3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.49■□□□□ 0.39
CLCA3PQ9Y6N3 HEIH-201ENST00000623091 1652 ntBASIC17.49■□□□□ 0.39
CLCA3PQ9Y6N3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.49■□□□□ 0.39
CLCA3PQ9Y6N3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.49■□□□□ 0.39
CLCA3PQ9Y6N3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCA3PQ9Y6N3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.49■□□□□ 0.39
CLCA3PQ9Y6N3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCA3PQ9Y6N3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCA3PQ9Y6N3 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCA3PQ9Y6N3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CLCA3PQ9Y6N3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
CLCA3PQ9Y6N3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCA3PQ9Y6N3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCA3PQ9Y6N3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.49■□□□□ 0.39
CLCA3PQ9Y6N3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.49■□□□□ 0.39
CLCA3PQ9Y6N3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.49■□□□□ 0.39
CLCA3PQ9Y6N3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCA3PQ9Y6N3 AL138966.2-201ENST00000621997 464 ntBASIC17.49■□□□□ 0.39
CLCA3PQ9Y6N3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CLCA3PQ9Y6N3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CLCA3PQ9Y6N3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CLCA3PQ9Y6N3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCA3PQ9Y6N3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.49■□□□□ 0.39
CLCA3PQ9Y6N3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.49■□□□□ 0.39
CLCA3PQ9Y6N3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLCA3PQ9Y6N3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCA3PQ9Y6N3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLCA3PQ9Y6N3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.49■□□□□ 0.39
CLCA3PQ9Y6N3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.49■□□□□ 0.39
CLCA3PQ9Y6N3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCA3PQ9Y6N3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCA3PQ9Y6N3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CLCA3PQ9Y6N3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCA3PQ9Y6N3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCA3PQ9Y6N3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCA3PQ9Y6N3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CLCA3PQ9Y6N3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CLCA3PQ9Y6N3 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLCA3PQ9Y6N3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCA3PQ9Y6N3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLCA3PQ9Y6N3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCA3PQ9Y6N3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.48■□□□□ 0.39
CLCA3PQ9Y6N3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLCA3PQ9Y6N3 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCA3PQ9Y6N3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCA3PQ9Y6N3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCA3PQ9Y6N3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLCA3PQ9Y6N3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.48■□□□□ 0.39
CLCA3PQ9Y6N3 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.48■□□□□ 0.39
CLCA3PQ9Y6N3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.48■□□□□ 0.39
CLCA3PQ9Y6N3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms