Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC008556.1-201ENST00000610908 2040 ntBASIC17.97■□□□□ 0.47
PCDHGA11Q9Y5H2 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA11Q9Y5H2 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA11Q9Y5H2 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PCDHGA11Q9Y5H2 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA11Q9Y5H2 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHGA11Q9Y5H2 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHGA11Q9Y5H2 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PCDHGA11Q9Y5H2 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA11Q9Y5H2 AC126763.1-201ENST00000552015 2118 ntBASIC17.96■□□□□ 0.47
PCDHGA11Q9Y5H2 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHGA11Q9Y5H2 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHGA11Q9Y5H2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA11Q9Y5H2 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA11Q9Y5H2 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA11Q9Y5H2 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA11Q9Y5H2 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHGA11Q9Y5H2 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA11Q9Y5H2 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHGA11Q9Y5H2 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA11Q9Y5H2 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA11Q9Y5H2 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHGA11Q9Y5H2 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.96■□□□□ 0.47
PCDHGA11Q9Y5H2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHGA11Q9Y5H2 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA11Q9Y5H2 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PCDHGA11Q9Y5H2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA11Q9Y5H2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA11Q9Y5H2 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA11Q9Y5H2 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA11Q9Y5H2 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA11Q9Y5H2 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PCDHGA11Q9Y5H2 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA11Q9Y5H2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.96■□□□□ 0.46
PCDHGA11Q9Y5H2 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA11Q9Y5H2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.95■□□□□ 0.46
PCDHGA11Q9Y5H2 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA11Q9Y5H2 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA11Q9Y5H2 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA11Q9Y5H2 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PCDHGA11Q9Y5H2 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PCDHGA11Q9Y5H2 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PCDHGA11Q9Y5H2 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PCDHGA11Q9Y5H2 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA11Q9Y5H2 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PCDHGA11Q9Y5H2 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA11Q9Y5H2 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PCDHGA11Q9Y5H2 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.95■□□□□ 0.46
PCDHGA11Q9Y5H2 SLC25A1P2-201ENST00000430693 912 ntBASIC17.95■□□□□ 0.46
PCDHGA11Q9Y5H2 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHGA11Q9Y5H2 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA11Q9Y5H2 AL499627.1-201ENST00000569373 2188 ntBASIC17.95■□□□□ 0.46
PCDHGA11Q9Y5H2 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA11Q9Y5H2 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
PCDHGA11Q9Y5H2 GPAT2P1-201ENST00000444924 1672 ntBASIC17.95■□□□□ 0.46
PCDHGA11Q9Y5H2 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHGA11Q9Y5H2 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PCDHGA11Q9Y5H2 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA11Q9Y5H2 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.95■□□□□ 0.46
PCDHGA11Q9Y5H2 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA11Q9Y5H2 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
PCDHGA11Q9Y5H2 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA11Q9Y5H2 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA11Q9Y5H2 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHGA11Q9Y5H2 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHGA11Q9Y5H2 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHGA11Q9Y5H2 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PCDHGA11Q9Y5H2 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA11Q9Y5H2 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 MIR564-202ENST00000385049 94 ntBASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 SNORA78-201ENST00000459373 127 ntBASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 KRT18P41-201ENST00000518924 1277 ntBASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms