Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA9Q9Y5G4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHGA9Q9Y5G4 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.3■□□□□ 0.36
PCDHGA9Q9Y5G4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA9Q9Y5G4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA9Q9Y5G4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHGA9Q9Y5G4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDHGA9Q9Y5G4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA9Q9Y5G4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA9Q9Y5G4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA9Q9Y5G4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA9Q9Y5G4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA9Q9Y5G4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHGA9Q9Y5G4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHGA9Q9Y5G4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA9Q9Y5G4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHGA9Q9Y5G4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
PCDHGA9Q9Y5G4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA9Q9Y5G4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHGA9Q9Y5G4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA9Q9Y5G4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA9Q9Y5G4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA9Q9Y5G4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.29■□□□□ 0.36
PCDHGA9Q9Y5G4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
PCDHGA9Q9Y5G4 AC079602.3-201ENST00000623931 403 ntBASIC17.29■□□□□ 0.36
PCDHGA9Q9Y5G4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PCDHGA9Q9Y5G4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA9Q9Y5G4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA9Q9Y5G4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA9Q9Y5G4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
PCDHGA9Q9Y5G4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHGA9Q9Y5G4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA9Q9Y5G4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHGA9Q9Y5G4 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PCDHGA9Q9Y5G4 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA9Q9Y5G4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
PCDHGA9Q9Y5G4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA9Q9Y5G4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PCDHGA9Q9Y5G4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA9Q9Y5G4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA9Q9Y5G4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
PCDHGA9Q9Y5G4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDHGA9Q9Y5G4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGA9Q9Y5G4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PCDHGA9Q9Y5G4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA9Q9Y5G4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PCDHGA9Q9Y5G4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA9Q9Y5G4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PCDHGA9Q9Y5G4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA9Q9Y5G4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGA9Q9Y5G4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA9Q9Y5G4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA9Q9Y5G4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGA9Q9Y5G4 AL845331.1-201ENST00000424978 1190 ntBASIC17.28■□□□□ 0.36
PCDHGA9Q9Y5G4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGA9Q9Y5G4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHGA9Q9Y5G4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHGA9Q9Y5G4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.28■□□□□ 0.36
PCDHGA9Q9Y5G4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGA9Q9Y5G4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGA9Q9Y5G4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA9Q9Y5G4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA9Q9Y5G4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA9Q9Y5G4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA9Q9Y5G4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGA9Q9Y5G4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PCDHGA9Q9Y5G4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA9Q9Y5G4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA9Q9Y5G4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGA9Q9Y5G4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA9Q9Y5G4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGA9Q9Y5G4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGA9Q9Y5G4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
PCDHGA9Q9Y5G4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHGA9Q9Y5G4 SDHAP1-207ENST00000440850 2000 ntBASIC17.27■□□□□ 0.36
PCDHGA9Q9Y5G4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHGA9Q9Y5G4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGA9Q9Y5G4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGA9Q9Y5G4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.27■□□□□ 0.36
PCDHGA9Q9Y5G4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGA9Q9Y5G4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHGA9Q9Y5G4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.27■□□□□ 0.36
PCDHGA9Q9Y5G4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
PCDHGA9Q9Y5G4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.27■□□□□ 0.36
PCDHGA9Q9Y5G4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PCDHGA9Q9Y5G4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.27■□□□□ 0.36
PCDHGA9Q9Y5G4 AL157888.1-201ENST00000631930 593 ntBASIC17.27■□□□□ 0.36
PCDHGA9Q9Y5G4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGA9Q9Y5G4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGA9Q9Y5G4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGA9Q9Y5G4 KRT8P10-201ENST00000450021 1447 ntBASIC17.27■□□□□ 0.35
PCDHGA9Q9Y5G4 KRT8P7-201ENST00000533003 1432 ntBASIC17.27■□□□□ 0.35
PCDHGA9Q9Y5G4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGA9Q9Y5G4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.27■□□□□ 0.35
PCDHGA9Q9Y5G4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
PCDHGA9Q9Y5G4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGA9Q9Y5G4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGA9Q9Y5G4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGA9Q9Y5G4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
PCDHGA9Q9Y5G4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms