Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
NPIPA1Q9UND3 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.08■□□□□ 0.32
NPIPA1Q9UND3 AC069148.1-201ENST00000608741 768 ntBASIC17.08■□□□□ 0.32
NPIPA1Q9UND3 AC083849.1-201ENST00000615227 514 ntBASIC17.08■□□□□ 0.32
NPIPA1Q9UND3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
NPIPA1Q9UND3 AC004408.2-201ENST00000623613 2777 ntBASIC17.08■□□□□ 0.32
NPIPA1Q9UND3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.08■□□□□ 0.32
NPIPA1Q9UND3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.08■□□□□ 0.32
NPIPA1Q9UND3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPA1Q9UND3 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPA1Q9UND3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPA1Q9UND3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPA1Q9UND3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPA1Q9UND3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPA1Q9UND3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 FEM1AP3-201ENST00000403722 1741 ntBASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 HYMAI.1-201ENST00000620949 238 ntBASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA1Q9UND3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.06■□□□□ 0.32
NPIPA1Q9UND3 AC036111.1-201ENST00000533973 1582 ntBASIC17.06■□□□□ 0.32
NPIPA1Q9UND3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NPIPA1Q9UND3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.06■□□□□ 0.32
NPIPA1Q9UND3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
NPIPA1Q9UND3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPIPA1Q9UND3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPIPA1Q9UND3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.06■□□□□ 0.32
NPIPA1Q9UND3 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.06■□□□□ 0.32
NPIPA1Q9UND3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NPIPA1Q9UND3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NPIPA1Q9UND3 AL023284.2-201ENST00000405850 579 ntBASIC17.06■□□□□ 0.32
NPIPA1Q9UND3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPIPA1Q9UND3 KRT18P48-201ENST00000434763 852 ntBASIC17.06■□□□□ 0.32
NPIPA1Q9UND3 HCG4P8-203ENST00000443049 980 ntBASIC17.06■□□□□ 0.32
NPIPA1Q9UND3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.06■□□□□ 0.32
NPIPA1Q9UND3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.06■□□□□ 0.32
NPIPA1Q9UND3 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.06■□□□□ 0.32
NPIPA1Q9UND3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
NPIPA1Q9UND3 AC024243.1-201ENST00000609234 778 ntBASIC17.06■□□□□ 0.32
NPIPA1Q9UND3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.06■□□□□ 0.32
NPIPA1Q9UND3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.06■□□□□ 0.32
NPIPA1Q9UND3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NPIPA1Q9UND3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NPIPA1Q9UND3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
NPIPA1Q9UND3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.06■□□□□ 0.32
NPIPA1Q9UND3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NPIPA1Q9UND3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NPIPA1Q9UND3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
NPIPA1Q9UND3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
NPIPA1Q9UND3 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPIPA1Q9UND3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms