Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
HACD3Q9P035 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HACD3Q9P035 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HACD3Q9P035 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
HACD3Q9P035 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
HACD3Q9P035 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.73■□□□□ 0.59
HACD3Q9P035 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.72■□□□□ 0.59
HACD3Q9P035 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HACD3Q9P035 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
HACD3Q9P035 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.72■□□□□ 0.59
HACD3Q9P035 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
HACD3Q9P035 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
HACD3Q9P035 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.72■□□□□ 0.59
HACD3Q9P035 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HACD3Q9P035 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.72■□□□□ 0.59
HACD3Q9P035 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HACD3Q9P035 INGX-201ENST00000359239 846 ntBASIC18.72■□□□□ 0.59
HACD3Q9P035 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.72■□□□□ 0.59
HACD3Q9P035 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
HACD3Q9P035 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.72■□□□□ 0.59
HACD3Q9P035 ECEL1P2-202ENST00000465689 757 ntBASIC18.72■□□□□ 0.59
HACD3Q9P035 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.72■□□□□ 0.59
HACD3Q9P035 FAM87A-204ENST00000613235 858 ntBASIC18.72■□□□□ 0.59
HACD3Q9P035 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
HACD3Q9P035 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.72■□□□□ 0.59
HACD3Q9P035 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HACD3Q9P035 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HACD3Q9P035 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.72■□□□□ 0.59
HACD3Q9P035 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
HACD3Q9P035 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.72■□□□□ 0.59
HACD3Q9P035 KRT8P45-201ENST00000414328 1447 ntBASIC18.72■□□□□ 0.59
HACD3Q9P035 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HACD3Q9P035 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HACD3Q9P035 AC036111.1-201ENST00000533973 1582 ntBASIC18.72■□□□□ 0.59
HACD3Q9P035 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HACD3Q9P035 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.72■□□□□ 0.59
HACD3Q9P035 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
HACD3Q9P035 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
HACD3Q9P035 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HACD3Q9P035 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HACD3Q9P035 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
HACD3Q9P035 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HACD3Q9P035 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HACD3Q9P035 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HACD3Q9P035 AP000593.1-201ENST00000393668 712 ntBASIC18.71■□□□□ 0.59
HACD3Q9P035 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HACD3Q9P035 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.71■□□□□ 0.59
HACD3Q9P035 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
HACD3Q9P035 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.71■□□□□ 0.59
HACD3Q9P035 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.71■□□□□ 0.59
HACD3Q9P035 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.71■□□□□ 0.59
HACD3Q9P035 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HACD3Q9P035 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
HACD3Q9P035 KRT8P7-201ENST00000533003 1432 ntBASIC18.71■□□□□ 0.59
HACD3Q9P035 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HACD3Q9P035 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HACD3Q9P035 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HACD3Q9P035 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
HACD3Q9P035 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
HACD3Q9P035 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HACD3Q9P035 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HACD3Q9P035 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.7■□□□□ 0.58
HACD3Q9P035 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HACD3Q9P035 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
HACD3Q9P035 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
HACD3Q9P035 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HACD3Q9P035 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
HACD3Q9P035 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HACD3Q9P035 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HACD3Q9P035 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HACD3Q9P035 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
HACD3Q9P035 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HACD3Q9P035 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.7■□□□□ 0.58
HACD3Q9P035 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
HACD3Q9P035 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HACD3Q9P035 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.7■□□□□ 0.58
HACD3Q9P035 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.7■□□□□ 0.58
HACD3Q9P035 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HACD3Q9P035 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.7■□□□□ 0.58
HACD3Q9P035 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.7■□□□□ 0.58
HACD3Q9P035 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
HACD3Q9P035 AC133561.5-201ENST00000635547 218 ntBASIC18.7■□□□□ 0.58
HACD3Q9P035 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HACD3Q9P035 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
HACD3Q9P035 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.7■□□□□ 0.58
HACD3Q9P035 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HACD3Q9P035 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.7■□□□□ 0.58
HACD3Q9P035 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HACD3Q9P035 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
HACD3Q9P035 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
HACD3Q9P035 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HACD3Q9P035 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.69■□□□□ 0.58
HACD3Q9P035 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.69■□□□□ 0.58
HACD3Q9P035 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HACD3Q9P035 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.69■□□□□ 0.58
HACD3Q9P035 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.69■□□□□ 0.58
HACD3Q9P035 HOXB1-202ENST00000577092 1414 ntBASIC18.69■□□□□ 0.58
HACD3Q9P035 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HACD3Q9P035 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.69■□□□□ 0.58
HACD3Q9P035 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms