Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 AC012313.1-201ENST00000593393 3059 ntBASIC16.92■□□□□ 0.3
CLN6Q9NWW5 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLN6Q9NWW5 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLN6Q9NWW5 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CLN6Q9NWW5 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLN6Q9NWW5 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.91■□□□□ 0.3
CLN6Q9NWW5 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLN6Q9NWW5 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLN6Q9NWW5 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLN6Q9NWW5 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLN6Q9NWW5 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLN6Q9NWW5 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLN6Q9NWW5 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLN6Q9NWW5 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLN6Q9NWW5 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.91■□□□□ 0.3
CLN6Q9NWW5 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.91■□□□□ 0.3
CLN6Q9NWW5 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.91■□□□□ 0.3
CLN6Q9NWW5 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.91■□□□□ 0.3
CLN6Q9NWW5 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CLN6Q9NWW5 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.91■□□□□ 0.3
CLN6Q9NWW5 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.91■□□□□ 0.3
CLN6Q9NWW5 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.91■□□□□ 0.3
CLN6Q9NWW5 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.91■□□□□ 0.3
CLN6Q9NWW5 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLN6Q9NWW5 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.91■□□□□ 0.3
CLN6Q9NWW5 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.91■□□□□ 0.3
CLN6Q9NWW5 MYC-209ENST00000641252 345 ntBASIC16.91■□□□□ 0.3
CLN6Q9NWW5 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CLN6Q9NWW5 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLN6Q9NWW5 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLN6Q9NWW5 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLN6Q9NWW5 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLN6Q9NWW5 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.91■□□□□ 0.3
CLN6Q9NWW5 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CLN6Q9NWW5 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLN6Q9NWW5 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
CLN6Q9NWW5 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.9■□□□□ 0.3
CLN6Q9NWW5 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLN6Q9NWW5 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CLN6Q9NWW5 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLN6Q9NWW5 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.9■□□□□ 0.3
CLN6Q9NWW5 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLN6Q9NWW5 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLN6Q9NWW5 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLN6Q9NWW5 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLN6Q9NWW5 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CLN6Q9NWW5 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLN6Q9NWW5 OR6D1P-203ENST00000641209 4860 ntBASIC16.9■□□□□ 0.3
CLN6Q9NWW5 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.9■□□□□ 0.3
CLN6Q9NWW5 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
CLN6Q9NWW5 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLN6Q9NWW5 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.9■□□□□ 0.3
CLN6Q9NWW5 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.9■□□□□ 0.3
CLN6Q9NWW5 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CLN6Q9NWW5 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLN6Q9NWW5 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLN6Q9NWW5 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLN6Q9NWW5 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLN6Q9NWW5 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLN6Q9NWW5 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.9■□□□□ 0.3
CLN6Q9NWW5 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLN6Q9NWW5 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CLN6Q9NWW5 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.3
CLN6Q9NWW5 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLN6Q9NWW5 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLN6Q9NWW5 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.89■□□□□ 0.29
CLN6Q9NWW5 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLN6Q9NWW5 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CLN6Q9NWW5 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
CLN6Q9NWW5 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CLN6Q9NWW5 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.89■□□□□ 0.29
CLN6Q9NWW5 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLN6Q9NWW5 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.89■□□□□ 0.29
CLN6Q9NWW5 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLN6Q9NWW5 GUSBP6-202ENST00000438529 1198 ntBASIC16.89■□□□□ 0.29
CLN6Q9NWW5 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.89■□□□□ 0.29
CLN6Q9NWW5 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.89■□□□□ 0.29
CLN6Q9NWW5 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.89■□□□□ 0.29
CLN6Q9NWW5 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CLN6Q9NWW5 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLN6Q9NWW5 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLN6Q9NWW5 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLN6Q9NWW5 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.89■□□□□ 0.29
CLN6Q9NWW5 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLN6Q9NWW5 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms