Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 AC012306.2-201ENST00000609350 630 ntBASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBQLN4Q9NRR5 AC009113.1-201ENST00000570267 2443 ntBASIC17.02■□□□□ 0.32
UBQLN4Q9NRR5 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBQLN4Q9NRR5 AC104581.1-202ENST00000635932 2618 ntBASIC17.02■□□□□ 0.32
UBQLN4Q9NRR5 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBQLN4Q9NRR5 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBQLN4Q9NRR5 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBQLN4Q9NRR5 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
UBQLN4Q9NRR5 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBQLN4Q9NRR5 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBQLN4Q9NRR5 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBQLN4Q9NRR5 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBQLN4Q9NRR5 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBQLN4Q9NRR5 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBQLN4Q9NRR5 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBQLN4Q9NRR5 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.02■□□□□ 0.32
UBQLN4Q9NRR5 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.02■□□□□ 0.32
UBQLN4Q9NRR5 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBQLN4Q9NRR5 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.02■□□□□ 0.32
UBQLN4Q9NRR5 ECEL1P3-201ENST00000427961 737 ntBASIC17.02■□□□□ 0.32
UBQLN4Q9NRR5 LIN28AP1-201ENST00000429574 405 ntBASIC17.02■□□□□ 0.32
UBQLN4Q9NRR5 AC009947.2-201ENST00000444014 672 ntBASIC17.02■□□□□ 0.32
UBQLN4Q9NRR5 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.02■□□□□ 0.32
UBQLN4Q9NRR5 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
UBQLN4Q9NRR5 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBQLN4Q9NRR5 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBQLN4Q9NRR5 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
UBQLN4Q9NRR5 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.02■□□□□ 0.31
UBQLN4Q9NRR5 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
UBQLN4Q9NRR5 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
UBQLN4Q9NRR5 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
UBQLN4Q9NRR5 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.02■□□□□ 0.31
UBQLN4Q9NRR5 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
UBQLN4Q9NRR5 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
UBQLN4Q9NRR5 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
UBQLN4Q9NRR5 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
UBQLN4Q9NRR5 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 AC104390.1-201ENST00000555663 520 ntBASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 AC009065.1-201ENST00000564055 1225 ntBASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 AC005363.2-201ENST00000618631 242 ntBASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
UBQLN4Q9NRR5 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
UBQLN4Q9NRR5 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBQLN4Q9NRR5 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBQLN4Q9NRR5 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
UBQLN4Q9NRR5 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBQLN4Q9NRR5 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17■□□□□ 0.31
UBQLN4Q9NRR5 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBQLN4Q9NRR5 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBQLN4Q9NRR5 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBQLN4Q9NRR5 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
UBQLN4Q9NRR5 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBQLN4Q9NRR5 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBQLN4Q9NRR5 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17■□□□□ 0.31
UBQLN4Q9NRR5 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms