Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PRDM9Q9NQV7 AL441883.1-201ENST00000566170 1045 ntBASIC17.49■□□□□ 0.39
PRDM9Q9NQV7 LINC01238-205ENST00000567549 1107 ntBASIC17.49■□□□□ 0.39
PRDM9Q9NQV7 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PRDM9Q9NQV7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.49■□□□□ 0.39
PRDM9Q9NQV7 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PRDM9Q9NQV7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PRDM9Q9NQV7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRDM9Q9NQV7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PRDM9Q9NQV7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PRDM9Q9NQV7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRDM9Q9NQV7 AL162741.1-201ENST00000565563 1558 ntBASIC17.49■□□□□ 0.39
PRDM9Q9NQV7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PRDM9Q9NQV7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PRDM9Q9NQV7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.48■□□□□ 0.39
PRDM9Q9NQV7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRDM9Q9NQV7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRDM9Q9NQV7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRDM9Q9NQV7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRDM9Q9NQV7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRDM9Q9NQV7 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRDM9Q9NQV7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
PRDM9Q9NQV7 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRDM9Q9NQV7 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRDM9Q9NQV7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.48■□□□□ 0.39
PRDM9Q9NQV7 AC063952.2-201ENST00000498792 1227 ntBASIC17.48■□□□□ 0.39
PRDM9Q9NQV7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.48■□□□□ 0.39
PRDM9Q9NQV7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.48■□□□□ 0.39
PRDM9Q9NQV7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRDM9Q9NQV7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
PRDM9Q9NQV7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRDM9Q9NQV7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRDM9Q9NQV7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.48■□□□□ 0.39
PRDM9Q9NQV7 AC090164.3-201ENST00000610780 2143 ntBASIC17.48■□□□□ 0.39
PRDM9Q9NQV7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRDM9Q9NQV7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.48■□□□□ 0.39
PRDM9Q9NQV7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRDM9Q9NQV7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRDM9Q9NQV7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRDM9Q9NQV7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRDM9Q9NQV7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PRDM9Q9NQV7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.47■□□□□ 0.39
PRDM9Q9NQV7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRDM9Q9NQV7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRDM9Q9NQV7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
PRDM9Q9NQV7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRDM9Q9NQV7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRDM9Q9NQV7 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PRDM9Q9NQV7 MIR1224-201ENST00000408193 85 ntBASIC17.47■□□□□ 0.39
PRDM9Q9NQV7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRDM9Q9NQV7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.47■□□□□ 0.39
PRDM9Q9NQV7 HOMER2P1-201ENST00000455653 964 ntBASIC17.47■□□□□ 0.39
PRDM9Q9NQV7 AC092647.4-201ENST00000457211 535 ntBASIC17.47■□□□□ 0.39
PRDM9Q9NQV7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRDM9Q9NQV7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.47■□□□□ 0.39
PRDM9Q9NQV7 GCSHP2-201ENST00000560971 527 ntBASIC17.47■□□□□ 0.39
PRDM9Q9NQV7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.47■□□□□ 0.39
PRDM9Q9NQV7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.47■□□□□ 0.39
PRDM9Q9NQV7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.47■□□□□ 0.39
PRDM9Q9NQV7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
PRDM9Q9NQV7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.47■□□□□ 0.39
PRDM9Q9NQV7 AC024243.1-201ENST00000609234 778 ntBASIC17.47■□□□□ 0.39
PRDM9Q9NQV7 AL590326.2-201ENST00000625139 305 ntBASIC17.47■□□□□ 0.39
PRDM9Q9NQV7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.47■□□□□ 0.39
PRDM9Q9NQV7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.47■□□□□ 0.39
PRDM9Q9NQV7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRDM9Q9NQV7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRDM9Q9NQV7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
PRDM9Q9NQV7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRDM9Q9NQV7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
PRDM9Q9NQV7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRDM9Q9NQV7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRDM9Q9NQV7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRDM9Q9NQV7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.47■□□□□ 0.39
PRDM9Q9NQV7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRDM9Q9NQV7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRDM9Q9NQV7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRDM9Q9NQV7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PRDM9Q9NQV7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRDM9Q9NQV7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRDM9Q9NQV7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PRDM9Q9NQV7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRDM9Q9NQV7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.46■□□□□ 0.39
PRDM9Q9NQV7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.46■□□□□ 0.39
PRDM9Q9NQV7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRDM9Q9NQV7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRDM9Q9NQV7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PRDM9Q9NQV7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PRDM9Q9NQV7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRDM9Q9NQV7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PRDM9Q9NQV7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
PRDM9Q9NQV7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.46■□□□□ 0.39
PRDM9Q9NQV7 AC022616.7-201ENST00000525383 220 ntBASIC17.46■□□□□ 0.39
PRDM9Q9NQV7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.46■□□□□ 0.39
PRDM9Q9NQV7 AC104390.1-201ENST00000555663 520 ntBASIC17.46■□□□□ 0.39
PRDM9Q9NQV7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.46■□□□□ 0.39
PRDM9Q9NQV7 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.46■□□□□ 0.39
PRDM9Q9NQV7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.46■□□□□ 0.39
PRDM9Q9NQV7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRDM9Q9NQV7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms