Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 IKBKGP1-201ENST00000612193 1073 ntBASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 AC090164.3-201ENST00000610780 2143 ntBASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 AC103702.1-201ENST00000548801 2630 ntBASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
C12orf4Q9NQ89 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 AL512353.2-201ENST00000448759 1962 ntBASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 FEM1AP3-201ENST00000403722 1741 ntBASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 MIR4758-201ENST00000577688 71 ntBASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
C12orf4Q9NQ89 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
C12orf4Q9NQ89 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.08■□□□□ 0.17
C12orf4Q9NQ89 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
C12orf4Q9NQ89 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
C12orf4Q9NQ89 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms