Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC40Q9H9A6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
LRRC40Q9H9A6 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC40Q9H9A6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC40Q9H9A6 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC40Q9H9A6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
LRRC40Q9H9A6 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC40Q9H9A6 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
LRRC40Q9H9A6 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC40Q9H9A6 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.81■□□□□ 0.6
LRRC40Q9H9A6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC40Q9H9A6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC40Q9H9A6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC40Q9H9A6 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.81■□□□□ 0.6
LRRC40Q9H9A6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC40Q9H9A6 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.81■□□□□ 0.6
LRRC40Q9H9A6 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
LRRC40Q9H9A6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
LRRC40Q9H9A6 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC40Q9H9A6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC40Q9H9A6 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC40Q9H9A6 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.81■□□□□ 0.6
LRRC40Q9H9A6 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.81■□□□□ 0.6
LRRC40Q9H9A6 C2orf69P3-201ENST00000565542 1120 ntBASIC18.81■□□□□ 0.6
LRRC40Q9H9A6 MIR4497-201ENST00000583208 89 ntBASIC18.81■□□□□ 0.6
LRRC40Q9H9A6 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
LRRC40Q9H9A6 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC40Q9H9A6 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC40Q9H9A6 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.81■□□□□ 0.6
LRRC40Q9H9A6 AC036111.1-201ENST00000533973 1582 ntBASIC18.81■□□□□ 0.6
LRRC40Q9H9A6 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC40Q9H9A6 AC090340.1-201ENST00000620778 4980 ntBASIC18.8■□□□□ 0.6
LRRC40Q9H9A6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
LRRC40Q9H9A6 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC40Q9H9A6 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC40Q9H9A6 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC40Q9H9A6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
LRRC40Q9H9A6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC40Q9H9A6 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
LRRC40Q9H9A6 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.8■□□□□ 0.6
LRRC40Q9H9A6 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.8■□□□□ 0.6
LRRC40Q9H9A6 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC40Q9H9A6 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.8■□□□□ 0.6
LRRC40Q9H9A6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.8■□□□□ 0.6
LRRC40Q9H9A6 AC116562.4-202ENST00000641738 218 ntBASIC18.8■□□□□ 0.6
LRRC40Q9H9A6 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC40Q9H9A6 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC40Q9H9A6 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LRRC40Q9H9A6 AC092338.2-201ENST00000568827 1415 ntBASIC18.8■□□□□ 0.6
LRRC40Q9H9A6 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC40Q9H9A6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC40Q9H9A6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC40Q9H9A6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC40Q9H9A6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC40Q9H9A6 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC40Q9H9A6 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
LRRC40Q9H9A6 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC40Q9H9A6 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC40Q9H9A6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.79■□□□□ 0.6
LRRC40Q9H9A6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC40Q9H9A6 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.79■□□□□ 0.6
LRRC40Q9H9A6 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.79■□□□□ 0.6
LRRC40Q9H9A6 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.79■□□□□ 0.6
LRRC40Q9H9A6 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC40Q9H9A6 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC40Q9H9A6 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC40Q9H9A6 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
LRRC40Q9H9A6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC40Q9H9A6 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.79■□□□□ 0.6
LRRC40Q9H9A6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.79■□□□□ 0.6
LRRC40Q9H9A6 BX088651.1-201ENST00000540551 451 ntBASIC18.79■□□□□ 0.6
LRRC40Q9H9A6 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.79■□□□□ 0.6
LRRC40Q9H9A6 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.79■□□□□ 0.6
LRRC40Q9H9A6 NOC2LP1-202ENST00000452600 2235 ntBASIC18.79■□□□□ 0.6
LRRC40Q9H9A6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC40Q9H9A6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.79■□□□□ 0.6
LRRC40Q9H9A6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.79■□□□□ 0.6
LRRC40Q9H9A6 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC40Q9H9A6 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC40Q9H9A6 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC40Q9H9A6 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC40Q9H9A6 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC40Q9H9A6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC40Q9H9A6 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC40Q9H9A6 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC40Q9H9A6 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC40Q9H9A6 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC40Q9H9A6 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC40Q9H9A6 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC40Q9H9A6 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC40Q9H9A6 KRT8P50-201ENST00000562022 1438 ntBASIC18.78■□□□□ 0.6
LRRC40Q9H9A6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC40Q9H9A6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.78■□□□□ 0.6
LRRC40Q9H9A6 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.78■□□□□ 0.6
LRRC40Q9H9A6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.78■□□□□ 0.6
LRRC40Q9H9A6 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.78■□□□□ 0.6
LRRC40Q9H9A6 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LRRC40Q9H9A6 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.78■□□□□ 0.6
LRRC40Q9H9A6 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.78■□□□□ 0.6
LRRC40Q9H9A6 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms