Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS11Q9H270 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
VPS11Q9H270 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VPS11Q9H270 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS11Q9H270 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS11Q9H270 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.65■□□□□ 0.58
VPS11Q9H270 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VPS11Q9H270 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS11Q9H270 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.65■□□□□ 0.58
VPS11Q9H270 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
VPS11Q9H270 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
VPS11Q9H270 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
VPS11Q9H270 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS11Q9H270 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.64■□□□□ 0.57
VPS11Q9H270 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
VPS11Q9H270 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VPS11Q9H270 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.64■□□□□ 0.57
VPS11Q9H270 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.64■□□□□ 0.57
VPS11Q9H270 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VPS11Q9H270 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.64■□□□□ 0.57
VPS11Q9H270 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.64■□□□□ 0.57
VPS11Q9H270 AC131212.4-201ENST00000623606 975 ntBASIC18.64■□□□□ 0.57
VPS11Q9H270 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.64■□□□□ 0.57
VPS11Q9H270 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.64■□□□□ 0.57
VPS11Q9H270 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
VPS11Q9H270 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS11Q9H270 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS11Q9H270 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS11Q9H270 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
VPS11Q9H270 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.64■□□□□ 0.57
VPS11Q9H270 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
VPS11Q9H270 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
VPS11Q9H270 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VPS11Q9H270 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
VPS11Q9H270 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.63■□□□□ 0.57
VPS11Q9H270 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS11Q9H270 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.63■□□□□ 0.57
VPS11Q9H270 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS11Q9H270 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS11Q9H270 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS11Q9H270 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS11Q9H270 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS11Q9H270 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.63■□□□□ 0.57
VPS11Q9H270 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS11Q9H270 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VPS11Q9H270 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
VPS11Q9H270 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.63■□□□□ 0.57
VPS11Q9H270 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS11Q9H270 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.63■□□□□ 0.57
VPS11Q9H270 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.63■□□□□ 0.57
VPS11Q9H270 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.63■□□□□ 0.57
VPS11Q9H270 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.63■□□□□ 0.57
VPS11Q9H270 AL445675.2-201ENST00000620291 557 ntBASIC18.63■□□□□ 0.57
VPS11Q9H270 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.63■□□□□ 0.57
VPS11Q9H270 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VPS11Q9H270 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.63■□□□□ 0.57
VPS11Q9H270 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.63■□□□□ 0.57
VPS11Q9H270 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VPS11Q9H270 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS11Q9H270 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.63■□□□□ 0.57
VPS11Q9H270 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS11Q9H270 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS11Q9H270 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS11Q9H270 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS11Q9H270 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VPS11Q9H270 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.63■□□□□ 0.57
VPS11Q9H270 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS11Q9H270 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
VPS11Q9H270 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.62■□□□□ 0.57
VPS11Q9H270 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VPS11Q9H270 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS11Q9H270 PRORSD1P-202ENST00000563365 2154 ntBASIC18.62■□□□□ 0.57
VPS11Q9H270 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VPS11Q9H270 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS11Q9H270 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS11Q9H270 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.62■□□□□ 0.57
VPS11Q9H270 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS11Q9H270 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS11Q9H270 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS11Q9H270 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS11Q9H270 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.62■□□□□ 0.57
VPS11Q9H270 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.62■□□□□ 0.57
VPS11Q9H270 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.62■□□□□ 0.57
VPS11Q9H270 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
VPS11Q9H270 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.62■□□□□ 0.57
VPS11Q9H270 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.62■□□□□ 0.57
VPS11Q9H270 MYC-208ENST00000641036 567 ntBASIC18.62■□□□□ 0.57
VPS11Q9H270 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.62■□□□□ 0.57
VPS11Q9H270 KRT8P32-201ENST00000512863 1461 ntBASIC18.62■□□□□ 0.57
VPS11Q9H270 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS11Q9H270 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS11Q9H270 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.62■□□□□ 0.57
VPS11Q9H270 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
VPS11Q9H270 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
VPS11Q9H270 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
VPS11Q9H270 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
VPS11Q9H270 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS11Q9H270 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
VPS11Q9H270 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS11Q9H270 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms