Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
FOXP3Q9BZS1 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FOXP3Q9BZS1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.13■□□□□ 0.65
FOXP3Q9BZS1 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
FOXP3Q9BZS1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXP3Q9BZS1 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FOXP3Q9BZS1 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.13■□□□□ 0.65
FOXP3Q9BZS1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
FOXP3Q9BZS1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
FOXP3Q9BZS1 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.13■□□□□ 0.65
FOXP3Q9BZS1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.13■□□□□ 0.65
FOXP3Q9BZS1 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.13■□□□□ 0.65
FOXP3Q9BZS1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
FOXP3Q9BZS1 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXP3Q9BZS1 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.13■□□□□ 0.65
FOXP3Q9BZS1 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.13■□□□□ 0.65
FOXP3Q9BZS1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
FOXP3Q9BZS1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.13■□□□□ 0.65
FOXP3Q9BZS1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXP3Q9BZS1 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXP3Q9BZS1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXP3Q9BZS1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXP3Q9BZS1 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
FOXP3Q9BZS1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXP3Q9BZS1 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXP3Q9BZS1 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXP3Q9BZS1 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXP3Q9BZS1 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXP3Q9BZS1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXP3Q9BZS1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXP3Q9BZS1 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.12■□□□□ 0.65
FOXP3Q9BZS1 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXP3Q9BZS1 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
FOXP3Q9BZS1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
FOXP3Q9BZS1 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.12■□□□□ 0.65
FOXP3Q9BZS1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FOXP3Q9BZS1 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
FOXP3Q9BZS1 NUDT16P1-203ENST00000513809 620 ntBASIC19.12■□□□□ 0.65
FOXP3Q9BZS1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FOXP3Q9BZS1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FOXP3Q9BZS1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXP3Q9BZS1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXP3Q9BZS1 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXP3Q9BZS1 AL499627.1-201ENST00000569373 2188 ntBASIC19.12■□□□□ 0.65
FOXP3Q9BZS1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FOXP3Q9BZS1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 TMPOP1-202ENST00000424642 1267 ntBASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 RBM17P1-201ENST00000453646 1190 ntBASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 Z85996.1-201ENST00000494644 937 ntBASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 PRSS44-201ENST00000515154 1146 ntBASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 RN7SL850P-201ENST00000579959 291 ntBASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 AP000525.1-201ENST00000608286 694 ntBASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 REXO1L10P-201ENST00000615707 1290 ntBASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 ESPNP-201ENST00000270691 2015 ntBASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
FOXP3Q9BZS1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
FOXP3Q9BZS1 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXP3Q9BZS1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
FOXP3Q9BZS1 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.1■□□□□ 0.65
FOXP3Q9BZS1 KRT8P9-201ENST00000558927 1449 ntBASIC19.1■□□□□ 0.65
FOXP3Q9BZS1 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FOXP3Q9BZS1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.1■□□□□ 0.65
FOXP3Q9BZS1 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.1■□□□□ 0.65
FOXP3Q9BZS1 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.1■□□□□ 0.65
FOXP3Q9BZS1 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.1■□□□□ 0.65
FOXP3Q9BZS1 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.1■□□□□ 0.65
FOXP3Q9BZS1 MIR6786-201ENST00000616843 113 ntBASIC19.1■□□□□ 0.65
FOXP3Q9BZS1 CR392000.1-201ENST00000624770 1228 ntBASIC19.1■□□□□ 0.65
FOXP3Q9BZS1 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.1■□□□□ 0.65
FOXP3Q9BZS1 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms