Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.94□□□□□ -0.34
VPS25Q9BRG1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS25Q9BRG1 AC121338.2-201ENST00000622535 1744 ntBASIC12.93□□□□□ -0.34
VPS25Q9BRG1 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS25Q9BRG1 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
VPS25Q9BRG1 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
VPS25Q9BRG1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS25Q9BRG1 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS25Q9BRG1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VPS25Q9BRG1 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
VPS25Q9BRG1 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS25Q9BRG1 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
VPS25Q9BRG1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
VPS25Q9BRG1 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.93□□□□□ -0.34
VPS25Q9BRG1 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.93□□□□□ -0.34
VPS25Q9BRG1 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS25Q9BRG1 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VPS25Q9BRG1 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VPS25Q9BRG1 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC12.93□□□□□ -0.34
VPS25Q9BRG1 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC12.93□□□□□ -0.34
VPS25Q9BRG1 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS25Q9BRG1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VPS25Q9BRG1 CEP120-209ENST00000515110 606 ntTSL 3 BASIC12.93□□□□□ -0.34
VPS25Q9BRG1 GAK-223ENST00000628912 497 ntTSL 5 BASIC12.93□□□□□ -0.34
VPS25Q9BRG1 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS25Q9BRG1 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS25Q9BRG1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS25Q9BRG1 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS25Q9BRG1 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC12.93□□□□□ -0.34
VPS25Q9BRG1 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VPS25Q9BRG1 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.93□□□□□ -0.34
VPS25Q9BRG1 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
VPS25Q9BRG1 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS25Q9BRG1 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS25Q9BRG1 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS25Q9BRG1 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS25Q9BRG1 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS25Q9BRG1 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
VPS25Q9BRG1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 AC016575.1-201ENST00000607026 382 ntBASIC12.92□□□□□ -0.34
VPS25Q9BRG1 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS25Q9BRG1 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
VPS25Q9BRG1 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS25Q9BRG1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC12.91□□□□□ -0.34
VPS25Q9BRG1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC12.91□□□□□ -0.34
VPS25Q9BRG1 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
VPS25Q9BRG1 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
VPS25Q9BRG1 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VPS25Q9BRG1 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS25Q9BRG1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS25Q9BRG1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS25Q9BRG1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS25Q9BRG1 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VPS25Q9BRG1 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS25Q9BRG1 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS25Q9BRG1 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS25Q9BRG1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS25Q9BRG1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
VPS25Q9BRG1 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
VPS25Q9BRG1 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS25Q9BRG1 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS25Q9BRG1 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
VPS25Q9BRG1 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS25Q9BRG1 AC133552.2-201ENST00000619106 1032 ntBASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms