Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CPNE1Q99829 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CPNE1Q99829 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPNE1Q99829 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPNE1Q99829 AC138028.4-201ENST00000564984 1845 ntBASIC18.52■□□□□ 0.56
CPNE1Q99829 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.52■□□□□ 0.56
CPNE1Q99829 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
CPNE1Q99829 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.52■□□□□ 0.56
CPNE1Q99829 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.52■□□□□ 0.56
CPNE1Q99829 FAM197Y1-201ENST00000421178 764 ntBASIC18.52■□□□□ 0.56
CPNE1Q99829 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.52■□□□□ 0.56
CPNE1Q99829 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.52■□□□□ 0.56
CPNE1Q99829 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CPNE1Q99829 MCCD1P1-208ENST00000445732 328 ntBASIC18.52■□□□□ 0.56
CPNE1Q99829 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.52■□□□□ 0.56
CPNE1Q99829 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.52■□□□□ 0.56
CPNE1Q99829 AL359736.2-201ENST00000621992 437 ntBASIC18.52■□□□□ 0.56
CPNE1Q99829 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.52■□□□□ 0.56
CPNE1Q99829 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.52■□□□□ 0.56
CPNE1Q99829 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CPNE1Q99829 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPNE1Q99829 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPNE1Q99829 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CPNE1Q99829 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CPNE1Q99829 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CPNE1Q99829 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CPNE1Q99829 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.52■□□□□ 0.55
CPNE1Q99829 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CPNE1Q99829 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.51■□□□□ 0.55
CPNE1Q99829 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE1Q99829 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CPNE1Q99829 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.51■□□□□ 0.55
CPNE1Q99829 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE1Q99829 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE1Q99829 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
CPNE1Q99829 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE1Q99829 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE1Q99829 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE1Q99829 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE1Q99829 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE1Q99829 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.51■□□□□ 0.55
CPNE1Q99829 SLC25A6P5-201ENST00000435663 894 ntBASIC18.51■□□□□ 0.55
CPNE1Q99829 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.51■□□□□ 0.55
CPNE1Q99829 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.51■□□□□ 0.55
CPNE1Q99829 CD177P1-201ENST00000606252 935 ntBASIC18.51■□□□□ 0.55
CPNE1Q99829 DGCR10-201ENST00000609839 495 ntBASIC18.51■□□□□ 0.55
CPNE1Q99829 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE1Q99829 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.51■□□□□ 0.55
CPNE1Q99829 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.51■□□□□ 0.55
CPNE1Q99829 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.51■□□□□ 0.55
CPNE1Q99829 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.51■□□□□ 0.55
CPNE1Q99829 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CPNE1Q99829 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.51■□□□□ 0.55
CPNE1Q99829 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE1Q99829 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE1Q99829 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE1Q99829 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.51■□□□□ 0.55
CPNE1Q99829 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE1Q99829 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CPNE1Q99829 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE1Q99829 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE1Q99829 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.51■□□□□ 0.55
CPNE1Q99829 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.51■□□□□ 0.55
CPNE1Q99829 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE1Q99829 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.5■□□□□ 0.55
CPNE1Q99829 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.5■□□□□ 0.55
CPNE1Q99829 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE1Q99829 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE1Q99829 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE1Q99829 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE1Q99829 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE1Q99829 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.5■□□□□ 0.55
CPNE1Q99829 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE1Q99829 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.5■□□□□ 0.55
CPNE1Q99829 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE1Q99829 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE1Q99829 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.5■□□□□ 0.55
CPNE1Q99829 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.5■□□□□ 0.55
CPNE1Q99829 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.5■□□□□ 0.55
CPNE1Q99829 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE1Q99829 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE1Q99829 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE1Q99829 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.5■□□□□ 0.55
CPNE1Q99829 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE1Q99829 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE1Q99829 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE1Q99829 GPAT2P1-201ENST00000444924 1672 ntBASIC18.5■□□□□ 0.55
CPNE1Q99829 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.5■□□□□ 0.55
CPNE1Q99829 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE1Q99829 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
CPNE1Q99829 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE1Q99829 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE1Q99829 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE1Q99829 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.49■□□□□ 0.55
CPNE1Q99829 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CPNE1Q99829 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE1Q99829 AC034236.2-201ENST00000606662 1610 ntBASIC18.49■□□□□ 0.55
CPNE1Q99829 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE1Q99829 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE1Q99829 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms