Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC13.99□□□□□ -0.17
AP1S3Q96PC3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC13.99□□□□□ -0.17
AP1S3Q96PC3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S3Q96PC3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S3Q96PC3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S3Q96PC3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC13.99□□□□□ -0.17
AP1S3Q96PC3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S3Q96PC3 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S3Q96PC3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S3Q96PC3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
AP1S3Q96PC3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S3Q96PC3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC13.99□□□□□ -0.17
AP1S3Q96PC3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S3Q96PC3 AC009113.1-201ENST00000570267 2443 ntBASIC13.99□□□□□ -0.17
AP1S3Q96PC3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S3Q96PC3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S3Q96PC3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S3Q96PC3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC13.99□□□□□ -0.17
AP1S3Q96PC3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S3Q96PC3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC13.99□□□□□ -0.17
AP1S3Q96PC3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
AP1S3Q96PC3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S3Q96PC3 WIZP1-201ENST00000531444 2299 ntBASIC13.99□□□□□ -0.17
AP1S3Q96PC3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
AP1S3Q96PC3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S3Q96PC3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S3Q96PC3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S3Q96PC3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC13.99□□□□□ -0.17
AP1S3Q96PC3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S3Q96PC3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
AP1S3Q96PC3 AL031598.1-201ENST00000561511 1773 ntBASIC13.99□□□□□ -0.17
AP1S3Q96PC3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S3Q96PC3 AC010980.2-201ENST00000587099 1412 ntBASIC13.98□□□□□ -0.17
AP1S3Q96PC3 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 AL356309.3-201ENST00000624132 1934 ntBASIC13.98□□□□□ -0.17
AP1S3Q96PC3 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 TSPY26P-202ENST00000565928 3884 ntBASIC13.98□□□□□ -0.17
AP1S3Q96PC3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 TFP1-202ENST00000475455 1573 ntBASIC13.98□□□□□ -0.17
AP1S3Q96PC3 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 DUX4L16-201ENST00000555130 1264 ntBASIC13.98□□□□□ -0.17
AP1S3Q96PC3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S3Q96PC3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP1S3Q96PC3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC13.97□□□□□ -0.17
AP1S3Q96PC3 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP1S3Q96PC3 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP1S3Q96PC3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC13.97□□□□□ -0.17
AP1S3Q96PC3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP1S3Q96PC3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
AP1S3Q96PC3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
AP1S3Q96PC3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC13.97□□□□□ -0.17
AP1S3Q96PC3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
AP1S3Q96PC3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP1S3Q96PC3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC13.97□□□□□ -0.17
AP1S3Q96PC3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP1S3Q96PC3 MKRN4P-201ENST00000444706 1521 ntBASIC13.97□□□□□ -0.17
AP1S3Q96PC3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
AP1S3Q96PC3 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP1S3Q96PC3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AP1S3Q96PC3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC13.97□□□□□ -0.17
AP1S3Q96PC3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC13.97□□□□□ -0.17
AP1S3Q96PC3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms