Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SLC46A1Q96NT5 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC46A1Q96NT5 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 AC079776.4-201ENST00000511039 504 ntBASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 AC074051.2-201ENST00000565115 352 ntBASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 AC010240.3-201ENST00000607688 395 ntBASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 AL353801.3-201ENST00000609898 542 ntBASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 HOXB1-202ENST00000577092 1414 ntBASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC46A1Q96NT5 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC46A1Q96NT5 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC46A1Q96NT5 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SLC46A1Q96NT5 AC233702.3-201ENST00000578656 1387 ntBASIC17.68■□□□□ 0.42
SLC46A1Q96NT5 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC46A1Q96NT5 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SLC46A1Q96NT5 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC46A1Q96NT5 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SLC46A1Q96NT5 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SLC46A1Q96NT5 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC46A1Q96NT5 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC46A1Q96NT5 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC46A1Q96NT5 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC46A1Q96NT5 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC46A1Q96NT5 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC46A1Q96NT5 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC46A1Q96NT5 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.68■□□□□ 0.42
SLC46A1Q96NT5 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC46A1Q96NT5 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC46A1Q96NT5 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC46A1Q96NT5 AC138894.3-201ENST00000603787 634 ntBASIC17.68■□□□□ 0.42
SLC46A1Q96NT5 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC46A1Q96NT5 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SLC46A1Q96NT5 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC46A1Q96NT5 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SLC46A1Q96NT5 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC46A1Q96NT5 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.68■□□□□ 0.42
SLC46A1Q96NT5 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC46A1Q96NT5 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC46A1Q96NT5 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC46A1Q96NT5 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC46A1Q96NT5 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC46A1Q96NT5 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC46A1Q96NT5 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC46A1Q96NT5 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC46A1Q96NT5 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC46A1Q96NT5 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC46A1Q96NT5 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC46A1Q96NT5 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC46A1Q96NT5 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC46A1Q96NT5 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SLC46A1Q96NT5 KRT16P4-201ENST00000453883 522 ntBASIC17.67■□□□□ 0.42
SLC46A1Q96NT5 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC46A1Q96NT5 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.67■□□□□ 0.42
SLC46A1Q96NT5 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC46A1Q96NT5 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.67■□□□□ 0.42
SLC46A1Q96NT5 Z69720.1-201ENST00000601483 472 ntBASIC17.67■□□□□ 0.42
SLC46A1Q96NT5 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.67■□□□□ 0.42
SLC46A1Q96NT5 AL390719.2-201ENST00000606993 987 ntBASIC17.67■□□□□ 0.42
SLC46A1Q96NT5 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC46A1Q96NT5 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC46A1Q96NT5 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC46A1Q96NT5 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC46A1Q96NT5 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC46A1Q96NT5 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC46A1Q96NT5 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SLC46A1Q96NT5 AC008556.1-201ENST00000610908 2040 ntBASIC17.66■□□□□ 0.42
SLC46A1Q96NT5 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC46A1Q96NT5 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC46A1Q96NT5 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC46A1Q96NT5 MRPL3P1-201ENST00000400109 1033 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms