Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.85■□□□□ 0.45
RNF31Q96EP0 AL157888.1-201ENST00000631930 593 ntBASIC17.85■□□□□ 0.45
RNF31Q96EP0 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
RNF31Q96EP0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF31Q96EP0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF31Q96EP0 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF31Q96EP0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF31Q96EP0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF31Q96EP0 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF31Q96EP0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF31Q96EP0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF31Q96EP0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF31Q96EP0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNF31Q96EP0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
RNF31Q96EP0 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNF31Q96EP0 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF31Q96EP0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.84■□□□□ 0.45
RNF31Q96EP0 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.84■□□□□ 0.45
RNF31Q96EP0 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.84■□□□□ 0.45
RNF31Q96EP0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.84■□□□□ 0.45
RNF31Q96EP0 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.84■□□□□ 0.45
RNF31Q96EP0 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.84■□□□□ 0.45
RNF31Q96EP0 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.84■□□□□ 0.45
RNF31Q96EP0 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
RNF31Q96EP0 CLEC4GP1-201ENST00000596555 870 ntBASIC17.84■□□□□ 0.45
RNF31Q96EP0 AC069148.1-201ENST00000608741 768 ntBASIC17.84■□□□□ 0.45
RNF31Q96EP0 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF31Q96EP0 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.84■□□□□ 0.45
RNF31Q96EP0 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF31Q96EP0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.84■□□□□ 0.45
RNF31Q96EP0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNF31Q96EP0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNF31Q96EP0 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF31Q96EP0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNF31Q96EP0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF31Q96EP0 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF31Q96EP0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF31Q96EP0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF31Q96EP0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.84■□□□□ 0.45
RNF31Q96EP0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF31Q96EP0 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF31Q96EP0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.83■□□□□ 0.45
RNF31Q96EP0 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RNF31Q96EP0 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RNF31Q96EP0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
RNF31Q96EP0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.83■□□□□ 0.45
RNF31Q96EP0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RNF31Q96EP0 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
RNF31Q96EP0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF31Q96EP0 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF31Q96EP0 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.83■□□□□ 0.44
RNF31Q96EP0 KRT18P48-201ENST00000434763 852 ntBASIC17.83■□□□□ 0.44
RNF31Q96EP0 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RNF31Q96EP0 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.83■□□□□ 0.44
RNF31Q96EP0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.83■□□□□ 0.44
RNF31Q96EP0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.83■□□□□ 0.44
RNF31Q96EP0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.83■□□□□ 0.44
RNF31Q96EP0 NEK4P2-201ENST00000580004 1012 ntBASIC17.83■□□□□ 0.44
RNF31Q96EP0 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.83■□□□□ 0.44
RNF31Q96EP0 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.83■□□□□ 0.44
RNF31Q96EP0 AC079602.3-201ENST00000623931 403 ntBASIC17.83■□□□□ 0.44
RNF31Q96EP0 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RNF31Q96EP0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RNF31Q96EP0 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.83■□□□□ 0.44
RNF31Q96EP0 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RNF31Q96EP0 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF31Q96EP0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF31Q96EP0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF31Q96EP0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF31Q96EP0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF31Q96EP0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF31Q96EP0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF31Q96EP0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF31Q96EP0 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF31Q96EP0 IRX1P1-201ENST00000438849 1838 ntBASIC17.82■□□□□ 0.44
RNF31Q96EP0 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF31Q96EP0 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF31Q96EP0 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF31Q96EP0 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
RNF31Q96EP0 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF31Q96EP0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF31Q96EP0 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF31Q96EP0 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.82■□□□□ 0.44
RNF31Q96EP0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF31Q96EP0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF31Q96EP0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF31Q96EP0 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF31Q96EP0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF31Q96EP0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF31Q96EP0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF31Q96EP0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF31Q96EP0 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF31Q96EP0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.82■□□□□ 0.44
RNF31Q96EP0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF31Q96EP0 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RNF31Q96EP0 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF31Q96EP0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF31Q96EP0 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF31Q96EP0 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF31Q96EP0 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms