Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40AQ8WXH6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40AQ8WXH6 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.3■□□□□ 0.2
RAB40AQ8WXH6 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.3■□□□□ 0.2
RAB40AQ8WXH6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.3■□□□□ 0.2
RAB40AQ8WXH6 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40AQ8WXH6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.3■□□□□ 0.2
RAB40AQ8WXH6 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RAB40AQ8WXH6 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40AQ8WXH6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40AQ8WXH6 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
RAB40AQ8WXH6 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40AQ8WXH6 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB40AQ8WXH6 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40AQ8WXH6 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40AQ8WXH6 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.29■□□□□ 0.2
RAB40AQ8WXH6 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40AQ8WXH6 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40AQ8WXH6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40AQ8WXH6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40AQ8WXH6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RAB40AQ8WXH6 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40AQ8WXH6 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40AQ8WXH6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40AQ8WXH6 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40AQ8WXH6 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
RAB40AQ8WXH6 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40AQ8WXH6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40AQ8WXH6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40AQ8WXH6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40AQ8WXH6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB40AQ8WXH6 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40AQ8WXH6 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.29■□□□□ 0.2
RAB40AQ8WXH6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40AQ8WXH6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40AQ8WXH6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.29■□□□□ 0.2
RAB40AQ8WXH6 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40AQ8WXH6 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40AQ8WXH6 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40AQ8WXH6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40AQ8WXH6 AP006587.1-201ENST00000534129 1502 ntBASIC16.29■□□□□ 0.2
RAB40AQ8WXH6 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RAB40AQ8WXH6 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40AQ8WXH6 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RAB40AQ8WXH6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40AQ8WXH6 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40AQ8WXH6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.29■□□□□ 0.2
RAB40AQ8WXH6 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 KRT17P2-201ENST00000300992 1314 ntBASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40AQ8WXH6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RAB40AQ8WXH6 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAB40AQ8WXH6 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.27■□□□□ 0.2
RAB40AQ8WXH6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RAB40AQ8WXH6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
RAB40AQ8WXH6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAB40AQ8WXH6 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.27■□□□□ 0.2
RAB40AQ8WXH6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms