Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 TSPY17P-201ENST00000450329 467 ntBASIC17.44■□□□□ 0.38
SIMC1Q8NDZ2 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SIMC1Q8NDZ2 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
SIMC1Q8NDZ2 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.44■□□□□ 0.38
SIMC1Q8NDZ2 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.44■□□□□ 0.38
SIMC1Q8NDZ2 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
SIMC1Q8NDZ2 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.44■□□□□ 0.38
SIMC1Q8NDZ2 AC116562.4-202ENST00000641738 218 ntBASIC17.44■□□□□ 0.38
SIMC1Q8NDZ2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SIMC1Q8NDZ2 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SIMC1Q8NDZ2 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.44■□□□□ 0.38
SIMC1Q8NDZ2 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIMC1Q8NDZ2 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.44■□□□□ 0.38
SIMC1Q8NDZ2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SIMC1Q8NDZ2 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SIMC1Q8NDZ2 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIMC1Q8NDZ2 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIMC1Q8NDZ2 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SIMC1Q8NDZ2 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIMC1Q8NDZ2 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIMC1Q8NDZ2 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.43■□□□□ 0.38
SIMC1Q8NDZ2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIMC1Q8NDZ2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SIMC1Q8NDZ2 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIMC1Q8NDZ2 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
SIMC1Q8NDZ2 LINC01568-207ENST00000641790 1380 ntBASIC17.43■□□□□ 0.38
SIMC1Q8NDZ2 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.43■□□□□ 0.38
SIMC1Q8NDZ2 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SIMC1Q8NDZ2 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIMC1Q8NDZ2 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SIMC1Q8NDZ2 AL133373.2-201ENST00000623187 2828 ntBASIC17.43■□□□□ 0.38
SIMC1Q8NDZ2 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.43■□□□□ 0.38
SIMC1Q8NDZ2 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SIMC1Q8NDZ2 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIMC1Q8NDZ2 MCCD1P1-208ENST00000445732 328 ntBASIC17.43■□□□□ 0.38
SIMC1Q8NDZ2 CCR12P-201ENST00000446203 998 ntBASIC17.43■□□□□ 0.38
SIMC1Q8NDZ2 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.43■□□□□ 0.38
SIMC1Q8NDZ2 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.43■□□□□ 0.38
SIMC1Q8NDZ2 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.43■□□□□ 0.38
SIMC1Q8NDZ2 KRT8P45-201ENST00000414328 1447 ntBASIC17.43■□□□□ 0.38
SIMC1Q8NDZ2 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SIMC1Q8NDZ2 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SIMC1Q8NDZ2 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIMC1Q8NDZ2 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SIMC1Q8NDZ2 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIMC1Q8NDZ2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIMC1Q8NDZ2 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIMC1Q8NDZ2 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIMC1Q8NDZ2 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.43■□□□□ 0.38
SIMC1Q8NDZ2 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIMC1Q8NDZ2 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIMC1Q8NDZ2 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIMC1Q8NDZ2 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SIMC1Q8NDZ2 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIMC1Q8NDZ2 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIMC1Q8NDZ2 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.42■□□□□ 0.38
SIMC1Q8NDZ2 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIMC1Q8NDZ2 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.42■□□□□ 0.38
SIMC1Q8NDZ2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SIMC1Q8NDZ2 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.42■□□□□ 0.38
SIMC1Q8NDZ2 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIMC1Q8NDZ2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SIMC1Q8NDZ2 AC138932.1-201ENST00000534164 6830 ntBASIC17.42■□□□□ 0.38
SIMC1Q8NDZ2 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.42■□□□□ 0.38
SIMC1Q8NDZ2 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIMC1Q8NDZ2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.42■□□□□ 0.38
SIMC1Q8NDZ2 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIMC1Q8NDZ2 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIMC1Q8NDZ2 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIMC1Q8NDZ2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.42■□□□□ 0.38
SIMC1Q8NDZ2 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIMC1Q8NDZ2 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIMC1Q8NDZ2 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIMC1Q8NDZ2 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.42■□□□□ 0.38
SIMC1Q8NDZ2 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.42■□□□□ 0.38
SIMC1Q8NDZ2 CR769767.2-201ENST00000622735 460 ntBASIC17.42■□□□□ 0.38
SIMC1Q8NDZ2 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SIMC1Q8NDZ2 AC133561.5-201ENST00000635547 218 ntBASIC17.42■□□□□ 0.38
SIMC1Q8NDZ2 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIMC1Q8NDZ2 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SIMC1Q8NDZ2 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SIMC1Q8NDZ2 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SIMC1Q8NDZ2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.42■□□□□ 0.38
SIMC1Q8NDZ2 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIMC1Q8NDZ2 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIMC1Q8NDZ2 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIMC1Q8NDZ2 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIMC1Q8NDZ2 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIMC1Q8NDZ2 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIMC1Q8NDZ2 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIMC1Q8NDZ2 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIMC1Q8NDZ2 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SIMC1Q8NDZ2 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.41■□□□□ 0.38
SIMC1Q8NDZ2 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIMC1Q8NDZ2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIMC1Q8NDZ2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIMC1Q8NDZ2 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.41■□□□□ 0.38
SIMC1Q8NDZ2 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
SIMC1Q8NDZ2 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.41■□□□□ 0.38
SIMC1Q8NDZ2 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms