Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ARHGEF39Q8N4T4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.45■□□□□ 0.38
ARHGEF39Q8N4T4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ARHGEF39Q8N4T4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
ARHGEF39Q8N4T4 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.45■□□□□ 0.38
ARHGEF39Q8N4T4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
ARHGEF39Q8N4T4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ARHGEF39Q8N4T4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.44■□□□□ 0.38
ARHGEF39Q8N4T4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ARHGEF39Q8N4T4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.44■□□□□ 0.38
ARHGEF39Q8N4T4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ARHGEF39Q8N4T4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ARHGEF39Q8N4T4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.44■□□□□ 0.38
ARHGEF39Q8N4T4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ARHGEF39Q8N4T4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ARHGEF39Q8N4T4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ARHGEF39Q8N4T4 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ARHGEF39Q8N4T4 PCED1CP-201ENST00000419887 785 ntBASIC17.44■□□□□ 0.38
ARHGEF39Q8N4T4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ARHGEF39Q8N4T4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.44■□□□□ 0.38
ARHGEF39Q8N4T4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ARHGEF39Q8N4T4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.44■□□□□ 0.38
ARHGEF39Q8N4T4 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.44■□□□□ 0.38
ARHGEF39Q8N4T4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ARHGEF39Q8N4T4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.44■□□□□ 0.38
ARHGEF39Q8N4T4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ARHGEF39Q8N4T4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ARHGEF39Q8N4T4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
ARHGEF39Q8N4T4 AL138781.2-201ENST00000617896 1843 ntBASIC17.44■□□□□ 0.38
ARHGEF39Q8N4T4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ARHGEF39Q8N4T4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ARHGEF39Q8N4T4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ARHGEF39Q8N4T4 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ARHGEF39Q8N4T4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
ARHGEF39Q8N4T4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ARHGEF39Q8N4T4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ARHGEF39Q8N4T4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
ARHGEF39Q8N4T4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ARHGEF39Q8N4T4 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ARHGEF39Q8N4T4 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ARHGEF39Q8N4T4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
ARHGEF39Q8N4T4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ARHGEF39Q8N4T4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.43■□□□□ 0.38
ARHGEF39Q8N4T4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.43■□□□□ 0.38
ARHGEF39Q8N4T4 AC126763.1-201ENST00000552015 2118 ntBASIC17.43■□□□□ 0.38
ARHGEF39Q8N4T4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.43■□□□□ 0.38
ARHGEF39Q8N4T4 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.43■□□□□ 0.38
ARHGEF39Q8N4T4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.43■□□□□ 0.38
ARHGEF39Q8N4T4 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
ARHGEF39Q8N4T4 AP000550.4-202ENST00000639755 178 ntBASIC17.43■□□□□ 0.38
ARHGEF39Q8N4T4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.43■□□□□ 0.38
ARHGEF39Q8N4T4 AL162741.1-201ENST00000565563 1558 ntBASIC17.43■□□□□ 0.38
ARHGEF39Q8N4T4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ARHGEF39Q8N4T4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ARHGEF39Q8N4T4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.43■□□□□ 0.38
ARHGEF39Q8N4T4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ARHGEF39Q8N4T4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ARHGEF39Q8N4T4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ARHGEF39Q8N4T4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
ARHGEF39Q8N4T4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ARHGEF39Q8N4T4 AC005082.1-201ENST00000413042 2259 ntBASIC17.42■□□□□ 0.38
ARHGEF39Q8N4T4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ARHGEF39Q8N4T4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ARHGEF39Q8N4T4 AC073592.3-201ENST00000625118 1834 ntBASIC17.42■□□□□ 0.38
ARHGEF39Q8N4T4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ARHGEF39Q8N4T4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ARHGEF39Q8N4T4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ARHGEF39Q8N4T4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ARHGEF39Q8N4T4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ARHGEF39Q8N4T4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ARHGEF39Q8N4T4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.42■□□□□ 0.38
ARHGEF39Q8N4T4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ARHGEF39Q8N4T4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ARHGEF39Q8N4T4 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.42■□□□□ 0.38
ARHGEF39Q8N4T4 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.42■□□□□ 0.38
ARHGEF39Q8N4T4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.42■□□□□ 0.38
ARHGEF39Q8N4T4 AL645929.1-201ENST00000420084 975 ntBASIC17.42■□□□□ 0.38
ARHGEF39Q8N4T4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ARHGEF39Q8N4T4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.42■□□□□ 0.38
ARHGEF39Q8N4T4 AC091076.1-201ENST00000610741 619 ntBASIC17.42■□□□□ 0.38
ARHGEF39Q8N4T4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.42■□□□□ 0.38
ARHGEF39Q8N4T4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ARHGEF39Q8N4T4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
ARHGEF39Q8N4T4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ARHGEF39Q8N4T4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
ARHGEF39Q8N4T4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.42■□□□□ 0.38
ARHGEF39Q8N4T4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
ARHGEF39Q8N4T4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ARHGEF39Q8N4T4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ARHGEF39Q8N4T4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ARHGEF39Q8N4T4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ARHGEF39Q8N4T4 AL024508.2-201ENST00000607749 1894 ntBASIC17.41■□□□□ 0.38
ARHGEF39Q8N4T4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ARHGEF39Q8N4T4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ARHGEF39Q8N4T4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ARHGEF39Q8N4T4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ARHGEF39Q8N4T4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.41■□□□□ 0.38
ARHGEF39Q8N4T4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ARHGEF39Q8N4T4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ARHGEF39Q8N4T4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms