Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAPH1Q70E73 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.63■□□□□ 0.57
RAPH1Q70E73 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RAPH1Q70E73 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAPH1Q70E73 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAPH1Q70E73 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.63■□□□□ 0.57
RAPH1Q70E73 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAPH1Q70E73 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.63■□□□□ 0.57
RAPH1Q70E73 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.63■□□□□ 0.57
RAPH1Q70E73 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAPH1Q70E73 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.63■□□□□ 0.57
RAPH1Q70E73 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.63■□□□□ 0.57
RAPH1Q70E73 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAPH1Q70E73 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RAPH1Q70E73 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAPH1Q70E73 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.62■□□□□ 0.57
RAPH1Q70E73 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAPH1Q70E73 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RAPH1Q70E73 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAPH1Q70E73 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAPH1Q70E73 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RAPH1Q70E73 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.62■□□□□ 0.57
RAPH1Q70E73 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAPH1Q70E73 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RAPH1Q70E73 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAPH1Q70E73 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.62■□□□□ 0.57
RAPH1Q70E73 AC004951.3-201ENST00000418645 1148 ntBASIC18.62■□□□□ 0.57
RAPH1Q70E73 KSR1P1-201ENST00000446298 240 ntBASIC18.62■□□□□ 0.57
RAPH1Q70E73 AC091390.4-202ENST00000476426 537 ntBASIC18.62■□□□□ 0.57
RAPH1Q70E73 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.62■□□□□ 0.57
RAPH1Q70E73 C1QBPP2-201ENST00000528754 825 ntBASIC18.62■□□□□ 0.57
RAPH1Q70E73 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAPH1Q70E73 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
RAPH1Q70E73 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.62■□□□□ 0.57
RAPH1Q70E73 KRT8P3-201ENST00000519669 1449 ntBASIC18.62■□□□□ 0.57
RAPH1Q70E73 KRT8P32-201ENST00000512863 1461 ntBASIC18.62■□□□□ 0.57
RAPH1Q70E73 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.62■□□□□ 0.57
RAPH1Q70E73 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.62■□□□□ 0.57
RAPH1Q70E73 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.62■□□□□ 0.57
RAPH1Q70E73 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RAPH1Q70E73 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAPH1Q70E73 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.62■□□□□ 0.57
RAPH1Q70E73 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAPH1Q70E73 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.62■□□□□ 0.57
RAPH1Q70E73 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAPH1Q70E73 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RAPH1Q70E73 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAPH1Q70E73 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAPH1Q70E73 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
RAPH1Q70E73 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.61■□□□□ 0.57
RAPH1Q70E73 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAPH1Q70E73 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAPH1Q70E73 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAPH1Q70E73 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAPH1Q70E73 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
RAPH1Q70E73 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAPH1Q70E73 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
RAPH1Q70E73 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAPH1Q70E73 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAPH1Q70E73 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAPH1Q70E73 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAPH1Q70E73 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAPH1Q70E73 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.61■□□□□ 0.57
RAPH1Q70E73 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RAPH1Q70E73 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RAPH1Q70E73 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.61■□□□□ 0.57
RAPH1Q70E73 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAPH1Q70E73 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.61■□□□□ 0.57
RAPH1Q70E73 MYC-208ENST00000641036 567 ntBASIC18.61■□□□□ 0.57
RAPH1Q70E73 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.61■□□□□ 0.57
RAPH1Q70E73 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
RAPH1Q70E73 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAPH1Q70E73 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAPH1Q70E73 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAPH1Q70E73 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAPH1Q70E73 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
RAPH1Q70E73 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAPH1Q70E73 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.6■□□□□ 0.57
RAPH1Q70E73 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAPH1Q70E73 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAPH1Q70E73 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAPH1Q70E73 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAPH1Q70E73 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RAPH1Q70E73 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAPH1Q70E73 KRT16P1-201ENST00000399124 1418 ntBASIC18.6■□□□□ 0.57
RAPH1Q70E73 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAPH1Q70E73 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
RAPH1Q70E73 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAPH1Q70E73 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAPH1Q70E73 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAPH1Q70E73 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.6■□□□□ 0.57
RAPH1Q70E73 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAPH1Q70E73 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.6■□□□□ 0.57
RAPH1Q70E73 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAPH1Q70E73 AL353807.1-201ENST00000427475 662 ntBASIC18.6■□□□□ 0.57
RAPH1Q70E73 AC128676.1-201ENST00000454392 318 ntBASIC18.6■□□□□ 0.57
RAPH1Q70E73 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.6■□□□□ 0.57
RAPH1Q70E73 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
RAPH1Q70E73 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAPH1Q70E73 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms