Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TREML4Q6UXN2 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TREML4Q6UXN2 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TREML4Q6UXN2 MESTP1-201ENST00000404287 994 ntBASIC15.18■□□□□ 0.02
TREML4Q6UXN2 PPP1R14BP5-201ENST00000440334 435 ntBASIC15.18■□□□□ 0.02
TREML4Q6UXN2 MTND4LP12-201ENST00000448237 295 ntBASIC15.18■□□□□ 0.02
TREML4Q6UXN2 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.18■□□□□ 0.02
TREML4Q6UXN2 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.18■□□□□ 0.02
TREML4Q6UXN2 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.18■□□□□ 0.02
TREML4Q6UXN2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC15.18■□□□□ 0.02
TREML4Q6UXN2 CLEC4GP1-201ENST00000596555 870 ntBASIC15.18■□□□□ 0.02
TREML4Q6UXN2 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TREML4Q6UXN2 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TREML4Q6UXN2 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC15.18■□□□□ 0.02
TREML4Q6UXN2 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TREML4Q6UXN2 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.18■□□□□ 0.02
TREML4Q6UXN2 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TREML4Q6UXN2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TREML4Q6UXN2 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC15.18■□□□□ 0.02
TREML4Q6UXN2 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TREML4Q6UXN2 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TREML4Q6UXN2 ANKRD18DP-204ENST00000455355 1975 ntBASIC15.18■□□□□ 0.02
TREML4Q6UXN2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TREML4Q6UXN2 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TREML4Q6UXN2 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 NOC2LP1-202ENST00000452600 2235 ntBASIC15.17■□□□□ 0.02
TREML4Q6UXN2 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 B3GAT3P1-201ENST00000471720 806 ntBASIC15.17■□□□□ 0.02
TREML4Q6UXN2 COX11P1-201ENST00000489116 835 ntBASIC15.17■□□□□ 0.02
TREML4Q6UXN2 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 FAM86EP-206ENST00000510506 987 ntBASIC15.17■□□□□ 0.02
TREML4Q6UXN2 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 AL589935.2-201ENST00000616471 1231 ntBASIC15.17■□□□□ 0.02
TREML4Q6UXN2 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.17■□□□□ 0.02
TREML4Q6UXN2 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.16■□□□□ 0.02
TREML4Q6UXN2 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TREML4Q6UXN2 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TREML4Q6UXN2 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.16■□□□□ 0.02
TREML4Q6UXN2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TREML4Q6UXN2 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.16■□□□□ 0.02
TREML4Q6UXN2 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TREML4Q6UXN2 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TREML4Q6UXN2 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC15.16■□□□□ 0.02
TREML4Q6UXN2 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.16■□□□□ 0.02
TREML4Q6UXN2 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TREML4Q6UXN2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.16■□□□□ 0.02
TREML4Q6UXN2 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TREML4Q6UXN2 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.16■□□□□ 0.02
TREML4Q6UXN2 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TREML4Q6UXN2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TREML4Q6UXN2 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TREML4Q6UXN2 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TREML4Q6UXN2 INGX-201ENST00000359239 846 ntBASIC15.16■□□□□ 0.02
TREML4Q6UXN2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TREML4Q6UXN2 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.16■□□□□ 0.02
TREML4Q6UXN2 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.16■□□□□ 0.02
TREML4Q6UXN2 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.16■□□□□ 0.02
TREML4Q6UXN2 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.16■□□□□ 0.02
TREML4Q6UXN2 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.16■□□□□ 0.02
TREML4Q6UXN2 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.16■□□□□ 0.02
TREML4Q6UXN2 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TREML4Q6UXN2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TREML4Q6UXN2 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TREML4Q6UXN2 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TREML4Q6UXN2 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TREML4Q6UXN2 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TREML4Q6UXN2 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TREML4Q6UXN2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms