Protein–RNA interactions for Protein: Q6TDU7

CASC1, Protein CASC1, humanhuman

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1Q6TDU7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC22.66■■□□□ 1.22
CASC1Q6TDU7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CASC1Q6TDU7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC22.66■■□□□ 1.22
CASC1Q6TDU7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC22.66■■□□□ 1.22
CASC1Q6TDU7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CASC1Q6TDU7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
CASC1Q6TDU7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
CASC1Q6TDU7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CASC1Q6TDU7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC22.66■■□□□ 1.22
CASC1Q6TDU7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC22.66■■□□□ 1.22
CASC1Q6TDU7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC22.66■■□□□ 1.22
CASC1Q6TDU7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CASC1Q6TDU7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC22.65■■□□□ 1.22
CASC1Q6TDU7 AC096733.2-201ENST00000609937 1394 ntBASIC22.65■■□□□ 1.22
CASC1Q6TDU7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CASC1Q6TDU7 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CASC1Q6TDU7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CASC1Q6TDU7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CASC1Q6TDU7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CASC1Q6TDU7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CASC1Q6TDU7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CASC1Q6TDU7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CASC1Q6TDU7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
CASC1Q6TDU7 MIR718-201ENST00000390190 70 ntBASIC22.65■■□□□ 1.22
CASC1Q6TDU7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CASC1Q6TDU7 MESTP1-201ENST00000404287 994 ntBASIC22.65■■□□□ 1.22
CASC1Q6TDU7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC22.65■■□□□ 1.22
CASC1Q6TDU7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CASC1Q6TDU7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC22.65■■□□□ 1.22
CASC1Q6TDU7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC22.65■■□□□ 1.22
CASC1Q6TDU7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC22.65■■□□□ 1.22
CASC1Q6TDU7 Z99916.2-201ENST00000604037 246 ntBASIC22.65■■□□□ 1.22
CASC1Q6TDU7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC22.65■■□□□ 1.22
CASC1Q6TDU7 AL049637.2-201ENST00000641778 930 ntBASIC22.65■■□□□ 1.22
CASC1Q6TDU7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
CASC1Q6TDU7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC22.65■■□□□ 1.22
CASC1Q6TDU7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC22.65■■□□□ 1.22
CASC1Q6TDU7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC22.64■■□□□ 1.22
CASC1Q6TDU7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CASC1Q6TDU7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
CASC1Q6TDU7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC22.64■■□□□ 1.22
CASC1Q6TDU7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
CASC1Q6TDU7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
CASC1Q6TDU7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC22.64■■□□□ 1.22
CASC1Q6TDU7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC22.64■■□□□ 1.22
CASC1Q6TDU7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CASC1Q6TDU7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CASC1Q6TDU7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
CASC1Q6TDU7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CASC1Q6TDU7 NOC2LP1-202ENST00000452600 2235 ntBASIC22.64■■□□□ 1.21
CASC1Q6TDU7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CASC1Q6TDU7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC22.64■■□□□ 1.21
CASC1Q6TDU7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC22.64■■□□□ 1.21
CASC1Q6TDU7 SLC25A1P4-201ENST00000567977 778 ntBASIC22.64■■□□□ 1.21
CASC1Q6TDU7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CASC1Q6TDU7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CASC1Q6TDU7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CASC1Q6TDU7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC22.64■■□□□ 1.21
CASC1Q6TDU7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC22.64■■□□□ 1.21
CASC1Q6TDU7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC22.64■■□□□ 1.21
CASC1Q6TDU7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
CASC1Q6TDU7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC22.64■■□□□ 1.21
CASC1Q6TDU7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC22.64■■□□□ 1.21
CASC1Q6TDU7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CASC1Q6TDU7 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
CASC1Q6TDU7 MYLKP1-201ENST00000509077 1580 ntBASIC22.63■■□□□ 1.21
CASC1Q6TDU7 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CASC1Q6TDU7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
CASC1Q6TDU7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CASC1Q6TDU7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CASC1Q6TDU7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CASC1Q6TDU7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
CASC1Q6TDU7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
CASC1Q6TDU7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
CASC1Q6TDU7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CASC1Q6TDU7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CASC1Q6TDU7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
CASC1Q6TDU7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CASC1Q6TDU7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC22.63■■□□□ 1.21
CASC1Q6TDU7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC22.63■■□□□ 1.21
CASC1Q6TDU7 NUDT16P1-203ENST00000513809 620 ntBASIC22.63■■□□□ 1.21
CASC1Q6TDU7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC22.63■■□□□ 1.21
CASC1Q6TDU7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
CASC1Q6TDU7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC22.63■■□□□ 1.21
CASC1Q6TDU7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC22.63■■□□□ 1.21
CASC1Q6TDU7 AC113410.3-201ENST00000623366 203 ntBASIC22.63■■□□□ 1.21
CASC1Q6TDU7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CASC1Q6TDU7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC22.63■■□□□ 1.21
CASC1Q6TDU7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CASC1Q6TDU7 AC008556.1-201ENST00000610908 2040 ntBASIC22.63■■□□□ 1.21
CASC1Q6TDU7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC22.63■■□□□ 1.21
CASC1Q6TDU7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CASC1Q6TDU7 AC018470.1-201ENST00000624790 3129 ntBASIC22.63■■□□□ 1.21
CASC1Q6TDU7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CASC1Q6TDU7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CASC1Q6TDU7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CASC1Q6TDU7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CASC1Q6TDU7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
CASC1Q6TDU7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
CASC1Q6TDU7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms