Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NIPAL3Q6P499 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.88■□□□□ 0.29
NIPAL3Q6P499 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.88■□□□□ 0.29
NIPAL3Q6P499 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NIPAL3Q6P499 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.88■□□□□ 0.29
NIPAL3Q6P499 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.88■□□□□ 0.29
NIPAL3Q6P499 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.88■□□□□ 0.29
NIPAL3Q6P499 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPAL3Q6P499 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
NIPAL3Q6P499 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPAL3Q6P499 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPAL3Q6P499 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
NIPAL3Q6P499 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.88■□□□□ 0.29
NIPAL3Q6P499 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPAL3Q6P499 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPAL3Q6P499 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPAL3Q6P499 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.88■□□□□ 0.29
NIPAL3Q6P499 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NIPAL3Q6P499 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL3Q6P499 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL3Q6P499 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.87■□□□□ 0.29
NIPAL3Q6P499 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.87■□□□□ 0.29
NIPAL3Q6P499 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.87■□□□□ 0.29
NIPAL3Q6P499 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.87■□□□□ 0.29
NIPAL3Q6P499 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
NIPAL3Q6P499 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL3Q6P499 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL3Q6P499 MTMR9LP-203ENST00000426597 1545 ntBASIC16.87■□□□□ 0.29
NIPAL3Q6P499 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL3Q6P499 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.87■□□□□ 0.29
NIPAL3Q6P499 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL3Q6P499 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
NIPAL3Q6P499 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.87■□□□□ 0.29
NIPAL3Q6P499 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
NIPAL3Q6P499 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.87■□□□□ 0.29
NIPAL3Q6P499 AP000525.1-201ENST00000608286 694 ntBASIC16.87■□□□□ 0.29
NIPAL3Q6P499 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.87■□□□□ 0.29
NIPAL3Q6P499 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL3Q6P499 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL3Q6P499 AC090340.1-201ENST00000620778 4980 ntBASIC16.87■□□□□ 0.29
NIPAL3Q6P499 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL3Q6P499 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL3Q6P499 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL3Q6P499 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL3Q6P499 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL3Q6P499 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NIPAL3Q6P499 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.87■□□□□ 0.29
NIPAL3Q6P499 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
NIPAL3Q6P499 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
NIPAL3Q6P499 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
NIPAL3Q6P499 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NIPAL3Q6P499 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NIPAL3Q6P499 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NIPAL3Q6P499 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
NIPAL3Q6P499 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NIPAL3Q6P499 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NIPAL3Q6P499 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.86■□□□□ 0.29
NIPAL3Q6P499 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NIPAL3Q6P499 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NIPAL3Q6P499 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
NIPAL3Q6P499 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NIPAL3Q6P499 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.86■□□□□ 0.29
NIPAL3Q6P499 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.86■□□□□ 0.29
NIPAL3Q6P499 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NIPAL3Q6P499 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NIPAL3Q6P499 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.86■□□□□ 0.29
NIPAL3Q6P499 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.86■□□□□ 0.29
NIPAL3Q6P499 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NIPAL3Q6P499 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
NIPAL3Q6P499 AL499627.1-201ENST00000569373 2188 ntBASIC16.86■□□□□ 0.29
NIPAL3Q6P499 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NIPAL3Q6P499 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NIPAL3Q6P499 AC096733.2-201ENST00000609937 1394 ntBASIC16.86■□□□□ 0.29
NIPAL3Q6P499 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.86■□□□□ 0.29
NIPAL3Q6P499 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
NIPAL3Q6P499 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.86■□□□□ 0.29
NIPAL3Q6P499 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NIPAL3Q6P499 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.86■□□□□ 0.29
NIPAL3Q6P499 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.86■□□□□ 0.29
NIPAL3Q6P499 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NIPAL3Q6P499 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NIPAL3Q6P499 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NIPAL3Q6P499 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NIPAL3Q6P499 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NIPAL3Q6P499 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NIPAL3Q6P499 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.85■□□□□ 0.29
NIPAL3Q6P499 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NIPAL3Q6P499 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
NIPAL3Q6P499 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NIPAL3Q6P499 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.85■□□□□ 0.29
NIPAL3Q6P499 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NIPAL3Q6P499 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NIPAL3Q6P499 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NIPAL3Q6P499 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NIPAL3Q6P499 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NIPAL3Q6P499 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
NIPAL3Q6P499 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.85■□□□□ 0.29
NIPAL3Q6P499 MIR1238-201ENST00000408483 83 ntBASIC16.85■□□□□ 0.29
NIPAL3Q6P499 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NIPAL3Q6P499 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms