Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 AC113410.3-201ENST00000623366 203 ntBASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 PKD1P1-201ENST00000458669 6805 ntBASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ATPAF1Q5TC12 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
ATPAF1Q5TC12 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.08■□□□□ 0.17
ATPAF1Q5TC12 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ATPAF1Q5TC12 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ATPAF1Q5TC12 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ATPAF1Q5TC12 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF1Q5TC12 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.08■□□□□ 0.16
ATPAF1Q5TC12 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF1Q5TC12 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF1Q5TC12 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF1Q5TC12 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
ATPAF1Q5TC12 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF1Q5TC12 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF1Q5TC12 Z85996.1-201ENST00000494644 937 ntBASIC16.08■□□□□ 0.16
ATPAF1Q5TC12 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.08■□□□□ 0.16
ATPAF1Q5TC12 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.08■□□□□ 0.16
ATPAF1Q5TC12 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF1Q5TC12 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.08■□□□□ 0.16
ATPAF1Q5TC12 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF1Q5TC12 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.08■□□□□ 0.16
ATPAF1Q5TC12 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF1Q5TC12 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF1Q5TC12 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
ATPAF1Q5TC12 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF1Q5TC12 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF1Q5TC12 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF1Q5TC12 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
ATPAF1Q5TC12 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF1Q5TC12 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF1Q5TC12 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF1Q5TC12 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF1Q5TC12 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.08■□□□□ 0.16
ATPAF1Q5TC12 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF1Q5TC12 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATPAF1Q5TC12 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATPAF1Q5TC12 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ATPAF1Q5TC12 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
ATPAF1Q5TC12 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATPAF1Q5TC12 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATPAF1Q5TC12 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
ATPAF1Q5TC12 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATPAF1Q5TC12 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATPAF1Q5TC12 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATPAF1Q5TC12 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
ATPAF1Q5TC12 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.07■□□□□ 0.16
ATPAF1Q5TC12 FAM197Y1-201ENST00000421178 764 ntBASIC16.07■□□□□ 0.16
ATPAF1Q5TC12 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.07■□□□□ 0.16
ATPAF1Q5TC12 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.07■□□□□ 0.16
ATPAF1Q5TC12 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.07■□□□□ 0.16
ATPAF1Q5TC12 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.07■□□□□ 0.16
ATPAF1Q5TC12 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.07■□□□□ 0.16
ATPAF1Q5TC12 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.07■□□□□ 0.16
ATPAF1Q5TC12 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.07■□□□□ 0.16
ATPAF1Q5TC12 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATPAF1Q5TC12 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATPAF1Q5TC12 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.07■□□□□ 0.16
ATPAF1Q5TC12 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATPAF1Q5TC12 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATPAF1Q5TC12 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
ATPAF1Q5TC12 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATPAF1Q5TC12 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATPAF1Q5TC12 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATPAF1Q5TC12 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
ATPAF1Q5TC12 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 SDHAP1-207ENST00000440850 2000 ntBASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
ATPAF1Q5TC12 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms