Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.57■■□□□ 1.04
SHROOM1Q2M3G4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC21.57■■□□□ 1.04
SHROOM1Q2M3G4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHROOM1Q2M3G4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC21.57■■□□□ 1.04
SHROOM1Q2M3G4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHROOM1Q2M3G4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SHROOM1Q2M3G4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHROOM1Q2M3G4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHROOM1Q2M3G4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SHROOM1Q2M3G4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHROOM1Q2M3G4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SHROOM1Q2M3G4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHROOM1Q2M3G4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.57■■□□□ 1.04
SHROOM1Q2M3G4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SHROOM1Q2M3G4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SHROOM1Q2M3G4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SHROOM1Q2M3G4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC21.56■■□□□ 1.04
SHROOM1Q2M3G4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHROOM1Q2M3G4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHROOM1Q2M3G4 AKR1C7P-201ENST00000305623 895 ntBASIC21.56■■□□□ 1.04
SHROOM1Q2M3G4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21.56■■□□□ 1.04
SHROOM1Q2M3G4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
SHROOM1Q2M3G4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC21.56■■□□□ 1.04
SHROOM1Q2M3G4 KRT16P4-201ENST00000453883 522 ntBASIC21.56■■□□□ 1.04
SHROOM1Q2M3G4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC21.56■■□□□ 1.04
SHROOM1Q2M3G4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHROOM1Q2M3G4 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.56■■□□□ 1.04
SHROOM1Q2M3G4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21.56■■□□□ 1.04
SHROOM1Q2M3G4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.56■■□□□ 1.04
SHROOM1Q2M3G4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC21.56■■□□□ 1.04
SHROOM1Q2M3G4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHROOM1Q2M3G4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHROOM1Q2M3G4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHROOM1Q2M3G4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SHROOM1Q2M3G4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHROOM1Q2M3G4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SHROOM1Q2M3G4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SHROOM1Q2M3G4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHROOM1Q2M3G4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHROOM1Q2M3G4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
SHROOM1Q2M3G4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHROOM1Q2M3G4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHROOM1Q2M3G4 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHROOM1Q2M3G4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHROOM1Q2M3G4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SHROOM1Q2M3G4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SHROOM1Q2M3G4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC21.55■■□□□ 1.04
SHROOM1Q2M3G4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SHROOM1Q2M3G4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC21.55■■□□□ 1.04
SHROOM1Q2M3G4 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC21.55■■□□□ 1.04
SHROOM1Q2M3G4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SHROOM1Q2M3G4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SHROOM1Q2M3G4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SHROOM1Q2M3G4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHROOM1Q2M3G4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SHROOM1Q2M3G4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHROOM1Q2M3G4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.55■■□□□ 1.04
SHROOM1Q2M3G4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.55■■□□□ 1.04
SHROOM1Q2M3G4 NSUN5P1-202ENST00000421140 1535 ntBASIC21.55■■□□□ 1.04
SHROOM1Q2M3G4 NSUN5P2-203ENST00000457352 1529 ntBASIC21.55■■□□□ 1.04
SHROOM1Q2M3G4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SHROOM1Q2M3G4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.54■■□□□ 1.04
SHROOM1Q2M3G4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SHROOM1Q2M3G4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SHROOM1Q2M3G4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHROOM1Q2M3G4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHROOM1Q2M3G4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SHROOM1Q2M3G4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC21.54■■□□□ 1.04
SHROOM1Q2M3G4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.54■■□□□ 1.04
SHROOM1Q2M3G4 AL121772.3-201ENST00000610840 674 ntBASIC21.54■■□□□ 1.04
SHROOM1Q2M3G4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SHROOM1Q2M3G4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC21.54■■□□□ 1.04
SHROOM1Q2M3G4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC21.54■■□□□ 1.04
SHROOM1Q2M3G4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SHROOM1Q2M3G4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
SHROOM1Q2M3G4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHROOM1Q2M3G4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHROOM1Q2M3G4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
SHROOM1Q2M3G4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SHROOM1Q2M3G4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHROOM1Q2M3G4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
SHROOM1Q2M3G4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.53■■□□□ 1.04
SHROOM1Q2M3G4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHROOM1Q2M3G4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHROOM1Q2M3G4 SDHAP2-201ENST00000455183 2001 ntBASIC21.53■■□□□ 1.04
SHROOM1Q2M3G4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.53■■□□□ 1.04
SHROOM1Q2M3G4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC21.53■■□□□ 1.04
SHROOM1Q2M3G4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC21.53■■□□□ 1.04
SHROOM1Q2M3G4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHROOM1Q2M3G4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHROOM1Q2M3G4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.53■■□□□ 1.04
SHROOM1Q2M3G4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.53■■□□□ 1.04
SHROOM1Q2M3G4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHROOM1Q2M3G4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHROOM1Q2M3G4 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHROOM1Q2M3G4 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHROOM1Q2M3G4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHROOM1Q2M3G4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.53■■□□□ 1.04
SHROOM1Q2M3G4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC21.53■■□□□ 1.04
SHROOM1Q2M3G4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms