Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IRX4P78413 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
IRX4P78413 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.25■□□□□ 0.67
IRX4P78413 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.25■□□□□ 0.67
IRX4P78413 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.25■□□□□ 0.67
IRX4P78413 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.25■□□□□ 0.67
IRX4P78413 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.25■□□□□ 0.67
IRX4P78413 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
IRX4P78413 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IRX4P78413 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IRX4P78413 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.25■□□□□ 0.67
IRX4P78413 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IRX4P78413 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.25■□□□□ 0.67
IRX4P78413 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IRX4P78413 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IRX4P78413 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IRX4P78413 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.25■□□□□ 0.67
IRX4P78413 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IRX4P78413 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
IRX4P78413 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IRX4P78413 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
IRX4P78413 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.24■□□□□ 0.67
IRX4P78413 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IRX4P78413 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
IRX4P78413 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
IRX4P78413 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.24■□□□□ 0.67
IRX4P78413 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
IRX4P78413 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IRX4P78413 AC141586.3-201ENST00000562166 1838 ntBASIC19.24■□□□□ 0.67
IRX4P78413 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
IRX4P78413 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
IRX4P78413 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IRX4P78413 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IRX4P78413 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
IRX4P78413 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.24■□□□□ 0.67
IRX4P78413 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.24■□□□□ 0.67
IRX4P78413 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
IRX4P78413 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
IRX4P78413 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
IRX4P78413 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.24■□□□□ 0.67
IRX4P78413 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.24■□□□□ 0.67
IRX4P78413 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.24■□□□□ 0.67
IRX4P78413 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.24■□□□□ 0.67
IRX4P78413 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.24■□□□□ 0.67
IRX4P78413 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.24■□□□□ 0.67
IRX4P78413 AL031432.5-201ENST00000641059 760 ntBASIC19.24■□□□□ 0.67
IRX4P78413 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IRX4P78413 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
IRX4P78413 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
IRX4P78413 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IRX4P78413 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
IRX4P78413 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
IRX4P78413 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IRX4P78413 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IRX4P78413 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IRX4P78413 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IRX4P78413 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
IRX4P78413 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IRX4P78413 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.23■□□□□ 0.67
IRX4P78413 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IRX4P78413 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IRX4P78413 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IRX4P78413 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
IRX4P78413 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IRX4P78413 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
IRX4P78413 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
IRX4P78413 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IRX4P78413 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
IRX4P78413 HOMER2P1-201ENST00000455653 964 ntBASIC19.23■□□□□ 0.67
IRX4P78413 AL359075.1-203ENST00000462729 1002 ntBASIC19.23■□□□□ 0.67
IRX4P78413 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.23■□□□□ 0.67
IRX4P78413 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.23■□□□□ 0.67
IRX4P78413 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.23■□□□□ 0.67
IRX4P78413 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IRX4P78413 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.23■□□□□ 0.67
IRX4P78413 AL023803.3-201ENST00000615559 522 ntBASIC19.23■□□□□ 0.67
IRX4P78413 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.23■□□□□ 0.67
IRX4P78413 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
IRX4P78413 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IRX4P78413 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.23■□□□□ 0.67
IRX4P78413 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.23■□□□□ 0.67
IRX4P78413 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IRX4P78413 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IRX4P78413 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IRX4P78413 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IRX4P78413 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.23■□□□□ 0.67
IRX4P78413 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IRX4P78413 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.23■□□□□ 0.67
IRX4P78413 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IRX4P78413 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IRX4P78413 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
IRX4P78413 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
IRX4P78413 AC018470.1-201ENST00000624790 3129 ntBASIC19.23■□□□□ 0.67
IRX4P78413 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
IRX4P78413 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.22■□□□□ 0.67
IRX4P78413 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
IRX4P78413 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IRX4P78413 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IRX4P78413 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
IRX4P78413 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms