Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC13.2□□□□□ -0.3
UBE2D3P61077 KRT8P3-201ENST00000519669 1449 ntBASIC13.2□□□□□ -0.3
UBE2D3P61077 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBE2D3P61077 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBE2D3P61077 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBE2D3P61077 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBE2D3P61077 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBE2D3P61077 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBE2D3P61077 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBE2D3P61077 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UBE2D3P61077 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC13.2□□□□□ -0.3
UBE2D3P61077 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2D3P61077 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
UBE2D3P61077 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC13.19□□□□□ -0.3
UBE2D3P61077 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC13.19□□□□□ -0.3
UBE2D3P61077 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2D3P61077 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2D3P61077 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2D3P61077 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC13.19□□□□□ -0.3
UBE2D3P61077 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
UBE2D3P61077 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2D3P61077 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2D3P61077 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC13.19□□□□□ -0.3
UBE2D3P61077 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
UBE2D3P61077 KRT8P32-201ENST00000512863 1461 ntBASIC13.19□□□□□ -0.3
UBE2D3P61077 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2D3P61077 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2D3P61077 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
UBE2D3P61077 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2D3P61077 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2D3P61077 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
UBE2D3P61077 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC13.19□□□□□ -0.3
UBE2D3P61077 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
UBE2D3P61077 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
UBE2D3P61077 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2D3P61077 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC13.19□□□□□ -0.3
UBE2D3P61077 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2D3P61077 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC13.19□□□□□ -0.3
UBE2D3P61077 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2D3P61077 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC13.19□□□□□ -0.3
UBE2D3P61077 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC13.19□□□□□ -0.3
UBE2D3P61077 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
UBE2D3P61077 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2D3P61077 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2D3P61077 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2D3P61077 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC13.19□□□□□ -0.3
UBE2D3P61077 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2D3P61077 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2D3P61077 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
UBE2D3P61077 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC13.19□□□□□ -0.3
UBE2D3P61077 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBE2D3P61077 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
UBE2D3P61077 MTMR9LP-203ENST00000426597 1545 ntBASIC13.18□□□□□ -0.3
UBE2D3P61077 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D3P61077 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
UBE2D3P61077 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC13.18□□□□□ -0.3
UBE2D3P61077 NFYC-AS1-201ENST00000606277 1687 ntBASIC13.18□□□□□ -0.3
UBE2D3P61077 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D3P61077 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D3P61077 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
UBE2D3P61077 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC13.18□□□□□ -0.3
UBE2D3P61077 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D3P61077 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D3P61077 AC126763.1-201ENST00000552015 2118 ntBASIC13.18□□□□□ -0.3
UBE2D3P61077 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC13.18□□□□□ -0.3
UBE2D3P61077 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
UBE2D3P61077 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC13.18□□□□□ -0.3
UBE2D3P61077 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D3P61077 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D3P61077 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D3P61077 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D3P61077 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D3P61077 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC13.18□□□□□ -0.3
UBE2D3P61077 AC004951.3-201ENST00000418645 1148 ntBASIC13.18□□□□□ -0.3
UBE2D3P61077 AC091390.4-202ENST00000476426 537 ntBASIC13.18□□□□□ -0.3
UBE2D3P61077 RPS2P4-201ENST00000476944 856 ntBASIC13.18□□□□□ -0.3
UBE2D3P61077 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D3P61077 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
UBE2D3P61077 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC13.18□□□□□ -0.3
UBE2D3P61077 AC026271.3-201ENST00000571884 352 ntBASIC13.18□□□□□ -0.3
UBE2D3P61077 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
UBE2D3P61077 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D3P61077 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D3P61077 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D3P61077 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D3P61077 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D3P61077 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D3P61077 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D3P61077 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D3P61077 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D3P61077 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC13.18□□□□□ -0.3
UBE2D3P61077 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D3P61077 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D3P61077 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D3P61077 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
UBE2D3P61077 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D3P61077 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC13.18□□□□□ -0.3
UBE2D3P61077 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
UBE2D3P61077 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UBE2D3P61077 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms