Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH12P55289 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDH12P55289 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.28■□□□□ 0.36
CDH12P55289 PKD1P1-201ENST00000458669 6805 ntBASIC17.27■□□□□ 0.36
CDH12P55289 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH12P55289 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH12P55289 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH12P55289 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CDH12P55289 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH12P55289 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.27■□□□□ 0.36
CDH12P55289 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.27■□□□□ 0.36
CDH12P55289 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH12P55289 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.36
CDH12P55289 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH12P55289 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH12P55289 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH12P55289 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH12P55289 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH12P55289 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH12P55289 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.27■□□□□ 0.36
CDH12P55289 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CDH12P55289 AL353708.3-201ENST00000610272 989 ntBASIC17.27■□□□□ 0.36
CDH12P55289 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH12P55289 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH12P55289 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDH12P55289 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH12P55289 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH12P55289 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CDH12P55289 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.27■□□□□ 0.35
CDH12P55289 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDH12P55289 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CDH12P55289 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.27■□□□□ 0.35
CDH12P55289 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDH12P55289 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CDH12P55289 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CDH12P55289 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDH12P55289 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CDH12P55289 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.26■□□□□ 0.35
CDH12P55289 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDH12P55289 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH12P55289 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH12P55289 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH12P55289 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH12P55289 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH12P55289 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CDH12P55289 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH12P55289 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH12P55289 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CDH12P55289 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CDH12P55289 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH12P55289 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.26■□□□□ 0.35
CDH12P55289 KSR1P1-201ENST00000446298 240 ntBASIC17.26■□□□□ 0.35
CDH12P55289 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CDH12P55289 RPPH1-201ENST00000516869 333 ntBASIC17.26■□□□□ 0.35
CDH12P55289 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.26■□□□□ 0.35
CDH12P55289 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDH12P55289 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CDH12P55289 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.26■□□□□ 0.35
CDH12P55289 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDH12P55289 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.26■□□□□ 0.35
CDH12P55289 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.26■□□□□ 0.35
CDH12P55289 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDH12P55289 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDH12P55289 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CDH12P55289 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CDH12P55289 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH12P55289 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CDH12P55289 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.26■□□□□ 0.35
CDH12P55289 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDH12P55289 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH12P55289 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
CDH12P55289 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDH12P55289 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH12P55289 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CDH12P55289 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH12P55289 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.26■□□□□ 0.35
CDH12P55289 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.26■□□□□ 0.35
CDH12P55289 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH12P55289 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH12P55289 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH12P55289 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH12P55289 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CDH12P55289 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH12P55289 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH12P55289 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH12P55289 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CDH12P55289 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.25■□□□□ 0.35
CDH12P55289 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH12P55289 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.25■□□□□ 0.35
CDH12P55289 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.25■□□□□ 0.35
CDH12P55289 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CDH12P55289 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.25■□□□□ 0.35
CDH12P55289 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.25■□□□□ 0.35
CDH12P55289 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.25■□□□□ 0.35
CDH12P55289 MYC-208ENST00000641036 567 ntBASIC17.25■□□□□ 0.35
CDH12P55289 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH12P55289 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH12P55289 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CDH12P55289 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH12P55289 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms