Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LIMK2P53671 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LIMK2P53671 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.69■□□□□ 0.58
LIMK2P53671 AL133373.2-201ENST00000623187 2828 ntBASIC18.69■□□□□ 0.58
LIMK2P53671 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LIMK2P53671 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
LIMK2P53671 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
LIMK2P53671 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.68■□□□□ 0.58
LIMK2P53671 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
LIMK2P53671 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LIMK2P53671 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LIMK2P53671 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LIMK2P53671 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LIMK2P53671 ARMC10P1-201ENST00000313754 855 ntBASIC18.68■□□□□ 0.58
LIMK2P53671 LIN28AP1-201ENST00000429574 405 ntBASIC18.68■□□□□ 0.58
LIMK2P53671 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.68■□□□□ 0.58
LIMK2P53671 AC008040.2-201ENST00000461049 708 ntBASIC18.68■□□□□ 0.58
LIMK2P53671 ECEL1P2-202ENST00000465689 757 ntBASIC18.68■□□□□ 0.58
LIMK2P53671 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.68■□□□□ 0.58
LIMK2P53671 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.68■□□□□ 0.58
LIMK2P53671 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.68■□□□□ 0.58
LIMK2P53671 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
LIMK2P53671 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.68■□□□□ 0.58
LIMK2P53671 MYC-208ENST00000641036 567 ntBASIC18.68■□□□□ 0.58
LIMK2P53671 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
LIMK2P53671 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LIMK2P53671 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LIMK2P53671 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.68■□□□□ 0.58
LIMK2P53671 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.68■□□□□ 0.58
LIMK2P53671 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LIMK2P53671 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.68■□□□□ 0.58
LIMK2P53671 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.68■□□□□ 0.58
LIMK2P53671 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LIMK2P53671 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.67■□□□□ 0.58
LIMK2P53671 AL357033.4-201ENST00000617703 1807 ntBASIC18.67■□□□□ 0.58
LIMK2P53671 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
LIMK2P53671 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LIMK2P53671 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
LIMK2P53671 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.67■□□□□ 0.58
LIMK2P53671 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.67■□□□□ 0.58
LIMK2P53671 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
LIMK2P53671 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LIMK2P53671 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LIMK2P53671 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.67■□□□□ 0.58
LIMK2P53671 FAM207BP-201ENST00000447172 505 ntBASIC18.67■□□□□ 0.58
LIMK2P53671 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
LIMK2P53671 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.67■□□□□ 0.58
LIMK2P53671 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.67■□□□□ 0.58
LIMK2P53671 AC010203.1-204ENST00000548782 407 ntBASIC18.67■□□□□ 0.58
LIMK2P53671 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.67■□□□□ 0.58
LIMK2P53671 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
LIMK2P53671 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
LIMK2P53671 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LIMK2P53671 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LIMK2P53671 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
LIMK2P53671 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LIMK2P53671 KRT8P45-201ENST00000414328 1447 ntBASIC18.66■□□□□ 0.58
LIMK2P53671 AC112777.1-201ENST00000540175 1423 ntBASIC18.66■□□□□ 0.58
LIMK2P53671 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.66■□□□□ 0.58
LIMK2P53671 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.66■□□□□ 0.58
LIMK2P53671 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LIMK2P53671 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.66■□□□□ 0.58
LIMK2P53671 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.66■□□□□ 0.58
LIMK2P53671 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LIMK2P53671 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LIMK2P53671 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LIMK2P53671 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.66■□□□□ 0.58
LIMK2P53671 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.66■□□□□ 0.58
LIMK2P53671 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.66■□□□□ 0.58
LIMK2P53671 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.66■□□□□ 0.58
LIMK2P53671 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.66■□□□□ 0.58
LIMK2P53671 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LIMK2P53671 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.66■□□□□ 0.58
LIMK2P53671 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.66■□□□□ 0.58
LIMK2P53671 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.66■□□□□ 0.58
LIMK2P53671 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LIMK2P53671 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.66■□□□□ 0.58
LIMK2P53671 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LIMK2P53671 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.66■□□□□ 0.58
LIMK2P53671 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.66■□□□□ 0.58
LIMK2P53671 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LIMK2P53671 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LIMK2P53671 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LIMK2P53671 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LIMK2P53671 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.66■□□□□ 0.58
LIMK2P53671 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.66■□□□□ 0.58
LIMK2P53671 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LIMK2P53671 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LIMK2P53671 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LIMK2P53671 AC096733.2-201ENST00000609937 1394 ntBASIC18.66■□□□□ 0.58
LIMK2P53671 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LIMK2P53671 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.66■□□□□ 0.58
LIMK2P53671 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LIMK2P53671 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LIMK2P53671 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LIMK2P53671 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.65■□□□□ 0.58
LIMK2P53671 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LIMK2P53671 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LIMK2P53671 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LIMK2P53671 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms