Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEK3P51956 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NEK3P51956 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.08■□□□□ 0.65
NEK3P51956 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
NEK3P51956 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.08■□□□□ 0.65
NEK3P51956 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.08■□□□□ 0.65
NEK3P51956 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NEK3P51956 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
NEK3P51956 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.08■□□□□ 0.65
NEK3P51956 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
NEK3P51956 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
NEK3P51956 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NEK3P51956 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
NEK3P51956 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.08■□□□□ 0.65
NEK3P51956 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NEK3P51956 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NEK3P51956 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NEK3P51956 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NEK3P51956 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.08■□□□□ 0.64
NEK3P51956 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.08■□□□□ 0.64
NEK3P51956 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NEK3P51956 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NEK3P51956 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.08■□□□□ 0.64
NEK3P51956 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NEK3P51956 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.08■□□□□ 0.64
NEK3P51956 FEM1AP3-201ENST00000403722 1741 ntBASIC19.08■□□□□ 0.64
NEK3P51956 ANO7L1-203ENST00000602586 1720 ntBASIC19.08■□□□□ 0.64
NEK3P51956 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NEK3P51956 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NEK3P51956 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NEK3P51956 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NEK3P51956 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
NEK3P51956 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
NEK3P51956 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NEK3P51956 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.07■□□□□ 0.64
NEK3P51956 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.07■□□□□ 0.64
NEK3P51956 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NEK3P51956 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NEK3P51956 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.07■□□□□ 0.64
NEK3P51956 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NEK3P51956 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NEK3P51956 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
NEK3P51956 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
NEK3P51956 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.07■□□□□ 0.64
NEK3P51956 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.07■□□□□ 0.64
NEK3P51956 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
NEK3P51956 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
NEK3P51956 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.07■□□□□ 0.64
NEK3P51956 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.07■□□□□ 0.64
NEK3P51956 AL445228.2-201ENST00000605589 952 ntBASIC19.07■□□□□ 0.64
NEK3P51956 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NEK3P51956 AC141257.4-201ENST00000634557 245 ntBASIC19.07■□□□□ 0.64
NEK3P51956 AC136944.6-201ENST00000634818 245 ntBASIC19.07■□□□□ 0.64
NEK3P51956 PCDHB18P-201ENST00000524813 2368 ntBASIC19.07■□□□□ 0.64
NEK3P51956 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NEK3P51956 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NEK3P51956 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NEK3P51956 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
NEK3P51956 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NEK3P51956 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NEK3P51956 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NEK3P51956 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
NEK3P51956 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
NEK3P51956 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NEK3P51956 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NEK3P51956 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.06■□□□□ 0.64
NEK3P51956 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.06■□□□□ 0.64
NEK3P51956 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NEK3P51956 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NEK3P51956 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NEK3P51956 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NEK3P51956 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NEK3P51956 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NEK3P51956 AK4P3-201ENST00000418260 669 ntBASIC19.06■□□□□ 0.64
NEK3P51956 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.06■□□□□ 0.64
NEK3P51956 KRT18P35-201ENST00000510488 1269 ntBASIC19.06■□□□□ 0.64
NEK3P51956 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NEK3P51956 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
NEK3P51956 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.06■□□□□ 0.64
NEK3P51956 AC083906.6-201ENST00000641366 219 ntBASIC19.06■□□□□ 0.64
NEK3P51956 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NEK3P51956 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NEK3P51956 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NEK3P51956 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NEK3P51956 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.06■□□□□ 0.64
NEK3P51956 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NEK3P51956 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NEK3P51956 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
NEK3P51956 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
NEK3P51956 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NEK3P51956 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NEK3P51956 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
NEK3P51956 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NEK3P51956 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
NEK3P51956 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NEK3P51956 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.05■□□□□ 0.64
NEK3P51956 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NEK3P51956 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.05■□□□□ 0.64
NEK3P51956 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NEK3P51956 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms