Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCNN1AP37088 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCNN1AP37088 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCNN1AP37088 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCNN1AP37088 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.25■□□□□ 0.67
SCNN1AP37088 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCNN1AP37088 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
SCNN1AP37088 RNF152P1-201ENST00000397754 604 ntBASIC19.25■□□□□ 0.67
SCNN1AP37088 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.25■□□□□ 0.67
SCNN1AP37088 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.25■□□□□ 0.67
SCNN1AP37088 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.25■□□□□ 0.67
SCNN1AP37088 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SCNN1AP37088 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
SCNN1AP37088 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCNN1AP37088 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.25■□□□□ 0.67
SCNN1AP37088 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCNN1AP37088 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.25■□□□□ 0.67
SCNN1AP37088 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCNN1AP37088 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCNN1AP37088 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCNN1AP37088 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCNN1AP37088 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCNN1AP37088 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SCNN1AP37088 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.24■□□□□ 0.67
SCNN1AP37088 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.24■□□□□ 0.67
SCNN1AP37088 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SCNN1AP37088 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCNN1AP37088 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SCNN1AP37088 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCNN1AP37088 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.24■□□□□ 0.67
SCNN1AP37088 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.24■□□□□ 0.67
SCNN1AP37088 HOMER2P1-201ENST00000455653 964 ntBASIC19.24■□□□□ 0.67
SCNN1AP37088 RASA4DP-201ENST00000460726 1199 ntBASIC19.24■□□□□ 0.67
SCNN1AP37088 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SCNN1AP37088 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.24■□□□□ 0.67
SCNN1AP37088 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.24■□□□□ 0.67
SCNN1AP37088 AL157888.1-201ENST00000631930 593 ntBASIC19.24■□□□□ 0.67
SCNN1AP37088 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.24■□□□□ 0.67
SCNN1AP37088 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCNN1AP37088 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCNN1AP37088 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCNN1AP37088 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SCNN1AP37088 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SCNN1AP37088 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
SCNN1AP37088 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCNN1AP37088 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCNN1AP37088 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCNN1AP37088 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SCNN1AP37088 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SCNN1AP37088 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCNN1AP37088 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCNN1AP37088 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCNN1AP37088 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCNN1AP37088 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCNN1AP37088 TSPY5P-201ENST00000426936 936 ntBASIC19.23■□□□□ 0.67
SCNN1AP37088 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SCNN1AP37088 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCNN1AP37088 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SCNN1AP37088 AC008687.5-201ENST00000593746 558 ntBASIC19.23■□□□□ 0.67
SCNN1AP37088 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
SCNN1AP37088 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.23■□□□□ 0.67
SCNN1AP37088 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCNN1AP37088 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCNN1AP37088 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCNN1AP37088 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SCNN1AP37088 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCNN1AP37088 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SCNN1AP37088 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCNN1AP37088 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCNN1AP37088 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCNN1AP37088 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCNN1AP37088 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SCNN1AP37088 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SCNN1AP37088 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SCNN1AP37088 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCNN1AP37088 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.22■□□□□ 0.67
SCNN1AP37088 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCNN1AP37088 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCNN1AP37088 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SCNN1AP37088 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
SCNN1AP37088 AC093677.2-201ENST00000600169 1863 ntBASIC19.22■□□□□ 0.67
SCNN1AP37088 AL024508.2-201ENST00000607749 1894 ntBASIC19.22■□□□□ 0.67
SCNN1AP37088 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SCNN1AP37088 AC104581.1-202ENST00000635932 2618 ntBASIC19.21■□□□□ 0.67
SCNN1AP37088 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCNN1AP37088 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SCNN1AP37088 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCNN1AP37088 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.21■□□□□ 0.67
SCNN1AP37088 AC135050.7-201ENST00000624508 2218 ntBASIC19.21■□□□□ 0.67
SCNN1AP37088 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCNN1AP37088 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SCNN1AP37088 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SCNN1AP37088 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SCNN1AP37088 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.21■□□□□ 0.67
SCNN1AP37088 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCNN1AP37088 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SCNN1AP37088 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCNN1AP37088 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SCNN1AP37088 AK4P3-201ENST00000418260 669 ntBASIC19.21■□□□□ 0.67
SCNN1AP37088 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms