Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCLP35914 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCLP35914 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCLP35914 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCLP35914 TMPOP1-202ENST00000424642 1267 ntBASIC18.43■□□□□ 0.54
HMGCLP35914 TSPY5P-201ENST00000426936 936 ntBASIC18.43■□□□□ 0.54
HMGCLP35914 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.43■□□□□ 0.54
HMGCLP35914 AC104076.2-201ENST00000448912 469 ntBASIC18.43■□□□□ 0.54
HMGCLP35914 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.43■□□□□ 0.54
HMGCLP35914 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.43■□□□□ 0.54
HMGCLP35914 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCLP35914 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCLP35914 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCLP35914 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.43■□□□□ 0.54
HMGCLP35914 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.43■□□□□ 0.54
HMGCLP35914 AC009113.1-201ENST00000570267 2443 ntBASIC18.43■□□□□ 0.54
HMGCLP35914 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCLP35914 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCLP35914 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCLP35914 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCLP35914 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCLP35914 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCLP35914 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
HMGCLP35914 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCLP35914 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCLP35914 AC104581.1-202ENST00000635932 2618 ntBASIC18.42■□□□□ 0.54
HMGCLP35914 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.42■□□□□ 0.54
HMGCLP35914 SDHAP2-201ENST00000455183 2001 ntBASIC18.42■□□□□ 0.54
HMGCLP35914 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.42■□□□□ 0.54
HMGCLP35914 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
HMGCLP35914 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCLP35914 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
HMGCLP35914 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCLP35914 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.42■□□□□ 0.54
HMGCLP35914 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCLP35914 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
HMGCLP35914 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.42■□□□□ 0.54
HMGCLP35914 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCLP35914 AK4P3-201ENST00000418260 669 ntBASIC18.42■□□□□ 0.54
HMGCLP35914 FAM210CP-201ENST00000445714 574 ntBASIC18.42■□□□□ 0.54
HMGCLP35914 AC034232.1-201ENST00000506026 1064 ntBASIC18.42■□□□□ 0.54
HMGCLP35914 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.42■□□□□ 0.54
HMGCLP35914 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
HMGCLP35914 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.42■□□□□ 0.54
HMGCLP35914 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCLP35914 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCLP35914 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.42■□□□□ 0.54
HMGCLP35914 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.42■□□□□ 0.54
HMGCLP35914 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCLP35914 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCLP35914 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCLP35914 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCLP35914 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCLP35914 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCLP35914 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCLP35914 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
HMGCLP35914 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCLP35914 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.41■□□□□ 0.54
HMGCLP35914 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCLP35914 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.41■□□□□ 0.54
HMGCLP35914 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCLP35914 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCLP35914 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCLP35914 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
HMGCLP35914 STARP1-201ENST00000397973 869 ntBASIC18.41■□□□□ 0.54
HMGCLP35914 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
HMGCLP35914 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCLP35914 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HMGCLP35914 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCLP35914 KRT18P21-201ENST00000515767 1272 ntBASIC18.41■□□□□ 0.54
HMGCLP35914 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
HMGCLP35914 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.41■□□□□ 0.54
HMGCLP35914 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.41■□□□□ 0.54
HMGCLP35914 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCLP35914 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
HMGCLP35914 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.41■□□□□ 0.54
HMGCLP35914 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.41■□□□□ 0.54
HMGCLP35914 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCLP35914 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCLP35914 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
HMGCLP35914 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
HMGCLP35914 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.41■□□□□ 0.54
HMGCLP35914 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLP35914 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLP35914 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.4■□□□□ 0.54
HMGCLP35914 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLP35914 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLP35914 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLP35914 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLP35914 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLP35914 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
HMGCLP35914 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
HMGCLP35914 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLP35914 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLP35914 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLP35914 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.4■□□□□ 0.54
HMGCLP35914 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLP35914 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLP35914 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLP35914 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms