Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 AC008556.1-201ENST00000610908 2040 ntBASIC16.11■□□□□ 0.17
ACKR3P25106 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.11■□□□□ 0.17
ACKR3P25106 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.11■□□□□ 0.17
ACKR3P25106 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
ACKR3P25106 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
ACKR3P25106 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ACKR3P25106 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.1■□□□□ 0.17
ACKR3P25106 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.1■□□□□ 0.17
ACKR3P25106 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.1■□□□□ 0.17
ACKR3P25106 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.1■□□□□ 0.17
ACKR3P25106 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
ACKR3P25106 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.1■□□□□ 0.17
ACKR3P25106 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ACKR3P25106 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
ACKR3P25106 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
ACKR3P25106 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
ACKR3P25106 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
ACKR3P25106 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ACKR3P25106 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.1■□□□□ 0.17
ACKR3P25106 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.1■□□□□ 0.17
ACKR3P25106 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ACKR3P25106 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ACKR3P25106 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ACKR3P25106 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ACKR3P25106 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.1■□□□□ 0.17
ACKR3P25106 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
ACKR3P25106 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ACKR3P25106 AL355355.2-201ENST00000442321 338 ntBASIC16.1■□□□□ 0.17
ACKR3P25106 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.1■□□□□ 0.17
ACKR3P25106 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.1■□□□□ 0.17
ACKR3P25106 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.1■□□□□ 0.17
ACKR3P25106 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ACKR3P25106 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
ACKR3P25106 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ACKR3P25106 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.1■□□□□ 0.17
ACKR3P25106 AL390961.4-201ENST00000623958 2535 ntBASIC16.1■□□□□ 0.17
ACKR3P25106 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
ACKR3P25106 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ACKR3P25106 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ACKR3P25106 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ACKR3P25106 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ACKR3P25106 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ACKR3P25106 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ACKR3P25106 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
ACKR3P25106 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
ACKR3P25106 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
ACKR3P25106 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ACKR3P25106 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ACKR3P25106 AL109659.2-201ENST00000606809 1674 ntBASIC16.09■□□□□ 0.17
ACKR3P25106 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ACKR3P25106 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ACKR3P25106 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ACKR3P25106 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.09■□□□□ 0.17
ACKR3P25106 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ACKR3P25106 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
ACKR3P25106 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ACKR3P25106 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.09■□□□□ 0.17
ACKR3P25106 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.09■□□□□ 0.17
ACKR3P25106 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ACKR3P25106 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.09■□□□□ 0.17
ACKR3P25106 AC008550.1-201ENST00000511500 884 ntBASIC16.09■□□□□ 0.17
ACKR3P25106 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.09■□□□□ 0.17
ACKR3P25106 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.09■□□□□ 0.17
ACKR3P25106 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.09■□□□□ 0.17
ACKR3P25106 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.09■□□□□ 0.17
ACKR3P25106 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ACKR3P25106 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.09■□□□□ 0.17
ACKR3P25106 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.09■□□□□ 0.17
ACKR3P25106 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.09■□□□□ 0.17
ACKR3P25106 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.09■□□□□ 0.17
ACKR3P25106 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ACKR3P25106 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ACKR3P25106 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ACKR3P25106 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ACKR3P25106 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
ACKR3P25106 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ACKR3P25106 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ACKR3P25106 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ACKR3P25106 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
ACKR3P25106 AL354751.1-201ENST00000412768 1863 ntBASIC16.08■□□□□ 0.17
ACKR3P25106 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ACKR3P25106 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.08■□□□□ 0.16
ACKR3P25106 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ACKR3P25106 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
ACKR3P25106 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ACKR3P25106 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
ACKR3P25106 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ACKR3P25106 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.08■□□□□ 0.16
ACKR3P25106 AP003071.4-201ENST00000562276 1284 ntBASIC16.08■□□□□ 0.16
ACKR3P25106 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.08■□□□□ 0.16
ACKR3P25106 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.08■□□□□ 0.16
ACKR3P25106 TMEM191A-211ENST00000637163 1067 ntBASIC16.08■□□□□ 0.16
ACKR3P25106 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ACKR3P25106 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ACKR3P25106 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ACKR3P25106 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
ACKR3P25106 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ACKR3P25106 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
ACKR3P25106 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ACKR3P25106 KRT8P45-201ENST00000414328 1447 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms