Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NFKB1P19838 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NFKB1P19838 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NFKB1P19838 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NFKB1P19838 KRT18P23-201ENST00000435622 1283 ntBASIC18.83■□□□□ 0.6
NFKB1P19838 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.83■□□□□ 0.6
NFKB1P19838 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
NFKB1P19838 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.83■□□□□ 0.6
NFKB1P19838 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
NFKB1P19838 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.83■□□□□ 0.6
NFKB1P19838 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NFKB1P19838 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NFKB1P19838 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NFKB1P19838 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NFKB1P19838 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NFKB1P19838 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NFKB1P19838 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
NFKB1P19838 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NFKB1P19838 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.83■□□□□ 0.6
NFKB1P19838 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.83■□□□□ 0.6
NFKB1P19838 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
NFKB1P19838 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NFKB1P19838 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
NFKB1P19838 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NFKB1P19838 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
NFKB1P19838 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NFKB1P19838 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.82■□□□□ 0.6
NFKB1P19838 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NFKB1P19838 AL354751.1-201ENST00000412768 1863 ntBASIC18.82■□□□□ 0.6
NFKB1P19838 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NFKB1P19838 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NFKB1P19838 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NFKB1P19838 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NFKB1P19838 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.82■□□□□ 0.6
NFKB1P19838 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
NFKB1P19838 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NFKB1P19838 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.82■□□□□ 0.6
NFKB1P19838 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NFKB1P19838 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.82■□□□□ 0.6
NFKB1P19838 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NFKB1P19838 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
NFKB1P19838 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NFKB1P19838 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NFKB1P19838 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NFKB1P19838 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.82■□□□□ 0.6
NFKB1P19838 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.82■□□□□ 0.6
NFKB1P19838 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
NFKB1P19838 HOXB1-202ENST00000577092 1414 ntBASIC18.82■□□□□ 0.6
NFKB1P19838 AL390961.4-201ENST00000623958 2535 ntBASIC18.81■□□□□ 0.6
NFKB1P19838 LINC01568-207ENST00000641790 1380 ntBASIC18.81■□□□□ 0.6
NFKB1P19838 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
NFKB1P19838 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFKB1P19838 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NFKB1P19838 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFKB1P19838 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
NFKB1P19838 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
NFKB1P19838 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFKB1P19838 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFKB1P19838 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFKB1P19838 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.81■□□□□ 0.6
NFKB1P19838 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.81■□□□□ 0.6
NFKB1P19838 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NFKB1P19838 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.81■□□□□ 0.6
NFKB1P19838 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFKB1P19838 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
NFKB1P19838 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFKB1P19838 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.81■□□□□ 0.6
NFKB1P19838 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFKB1P19838 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.81■□□□□ 0.6
NFKB1P19838 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
NFKB1P19838 AC087499.1-201ENST00000418141 1075 ntBASIC18.81■□□□□ 0.6
NFKB1P19838 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NFKB1P19838 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.81■□□□□ 0.6
NFKB1P19838 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.81■□□□□ 0.6
NFKB1P19838 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.81■□□□□ 0.6
NFKB1P19838 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.81■□□□□ 0.6
NFKB1P19838 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.81■□□□□ 0.6
NFKB1P19838 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.81■□□□□ 0.6
NFKB1P19838 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.81■□□□□ 0.6
NFKB1P19838 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.81■□□□□ 0.6
NFKB1P19838 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NFKB1P19838 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFKB1P19838 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFKB1P19838 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NFKB1P19838 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFKB1P19838 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
NFKB1P19838 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFKB1P19838 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFKB1P19838 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NFKB1P19838 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NFKB1P19838 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NFKB1P19838 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NFKB1P19838 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NFKB1P19838 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.8■□□□□ 0.6
NFKB1P19838 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NFKB1P19838 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NFKB1P19838 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NFKB1P19838 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NFKB1P19838 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NFKB1P19838 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms