Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 NEFHP1-201ENST00000412845 2629 ntBASIC19.43■□□□□ 0.7
PDGFRAP16234 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.43■□□□□ 0.7
PDGFRAP16234 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PDGFRAP16234 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFRAP16234 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFRAP16234 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFRAP16234 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFRAP16234 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PDGFRAP16234 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
PDGFRAP16234 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFRAP16234 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFRAP16234 KRT8P50-201ENST00000562022 1438 ntBASIC19.42■□□□□ 0.7
PDGFRAP16234 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFRAP16234 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFRAP16234 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFRAP16234 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.42■□□□□ 0.7
PDGFRAP16234 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PDGFRAP16234 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFRAP16234 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFRAP16234 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.42■□□□□ 0.7
PDGFRAP16234 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFRAP16234 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFRAP16234 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PDGFRAP16234 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
PDGFRAP16234 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFRAP16234 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.42■□□□□ 0.7
PDGFRAP16234 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PDGFRAP16234 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFRAP16234 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFRAP16234 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFRAP16234 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.42■□□□□ 0.7
PDGFRAP16234 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFRAP16234 KRT18P23-201ENST00000435622 1283 ntBASIC19.42■□□□□ 0.7
PDGFRAP16234 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.42■□□□□ 0.7
PDGFRAP16234 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFRAP16234 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.42■□□□□ 0.7
PDGFRAP16234 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.42■□□□□ 0.7
PDGFRAP16234 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFRAP16234 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFRAP16234 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.42■□□□□ 0.7
PDGFRAP16234 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.42■□□□□ 0.7
PDGFRAP16234 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFRAP16234 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.41■□□□□ 0.7
PDGFRAP16234 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFRAP16234 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PDGFRAP16234 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFRAP16234 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFRAP16234 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFRAP16234 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PDGFRAP16234 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PDGFRAP16234 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.41■□□□□ 0.7
PDGFRAP16234 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFRAP16234 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFRAP16234 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFRAP16234 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFRAP16234 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFRAP16234 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFRAP16234 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFRAP16234 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFRAP16234 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
PDGFRAP16234 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.41■□□□□ 0.7
PDGFRAP16234 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.41■□□□□ 0.7
PDGFRAP16234 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.41■□□□□ 0.7
PDGFRAP16234 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFRAP16234 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.41■□□□□ 0.7
PDGFRAP16234 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.41■□□□□ 0.7
PDGFRAP16234 AL512604.3-201ENST00000569583 964 ntBASIC19.41■□□□□ 0.7
PDGFRAP16234 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.41■□□□□ 0.7
PDGFRAP16234 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
PDGFRAP16234 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFRAP16234 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFRAP16234 HOXB1-202ENST00000577092 1414 ntBASIC19.41■□□□□ 0.7
PDGFRAP16234 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
PDGFRAP16234 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFRAP16234 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.41■□□□□ 0.7
PDGFRAP16234 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFRAP16234 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.41■□□□□ 0.7
PDGFRAP16234 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.41■□□□□ 0.7
PDGFRAP16234 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.41■□□□□ 0.7
PDGFRAP16234 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFRAP16234 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFRAP16234 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFRAP16234 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.4■□□□□ 0.7
PDGFRAP16234 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.4■□□□□ 0.7
PDGFRAP16234 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PDGFRAP16234 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PDGFRAP16234 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDGFRAP16234 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.4■□□□□ 0.7
PDGFRAP16234 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PDGFRAP16234 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.4■□□□□ 0.7
PDGFRAP16234 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PDGFRAP16234 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.4■□□□□ 0.7
PDGFRAP16234 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.4■□□□□ 0.7
PDGFRAP16234 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.4■□□□□ 0.7
PDGFRAP16234 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDGFRAP16234 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDGFRAP16234 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDGFRAP16234 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
PDGFRAP16234 KRT8P7-201ENST00000533003 1432 ntBASIC19.4■□□□□ 0.7
PDGFRAP16234 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms