Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDGFBP01127 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
PDGFBP01127 AL356309.3-201ENST00000624132 1934 ntBASIC18.57■□□□□ 0.56
PDGFBP01127 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFBP01127 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFBP01127 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFBP01127 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFBP01127 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFBP01127 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.56■□□□□ 0.56
PDGFBP01127 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFBP01127 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFBP01127 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
PDGFBP01127 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.56■□□□□ 0.56
PDGFBP01127 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.56■□□□□ 0.56
PDGFBP01127 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.56■□□□□ 0.56
PDGFBP01127 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.56■□□□□ 0.56
PDGFBP01127 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.56■□□□□ 0.56
PDGFBP01127 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.56■□□□□ 0.56
PDGFBP01127 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.56■□□□□ 0.56
PDGFBP01127 AC105339.3-201ENST00000560043 636 ntBASIC18.56■□□□□ 0.56
PDGFBP01127 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.56■□□□□ 0.56
PDGFBP01127 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFBP01127 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PDGFBP01127 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFBP01127 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFBP01127 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFBP01127 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFBP01127 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PDGFBP01127 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFBP01127 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.56■□□□□ 0.56
PDGFBP01127 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PDGFBP01127 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFBP01127 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFBP01127 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.56■□□□□ 0.56
PDGFBP01127 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.56■□□□□ 0.56
PDGFBP01127 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFBP01127 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFBP01127 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFBP01127 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFBP01127 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFBP01127 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFBP01127 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFBP01127 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.55■□□□□ 0.56
PDGFBP01127 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.55■□□□□ 0.56
PDGFBP01127 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFBP01127 AC009947.1-201ENST00000444350 727 ntBASIC18.55■□□□□ 0.56
PDGFBP01127 ABCD1P5-201ENST00000445663 754 ntBASIC18.55■□□□□ 0.56
PDGFBP01127 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.55■□□□□ 0.56
PDGFBP01127 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.55■□□□□ 0.56
PDGFBP01127 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.55■□□□□ 0.56
PDGFBP01127 SNHG9-202ENST00000564014 471 ntBASIC18.55■□□□□ 0.56
PDGFBP01127 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.55■□□□□ 0.56
PDGFBP01127 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.55■□□□□ 0.56
PDGFBP01127 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.55■□□□□ 0.56
PDGFBP01127 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFBP01127 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.55■□□□□ 0.56
PDGFBP01127 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFBP01127 AL357033.4-201ENST00000617703 1807 ntBASIC18.55■□□□□ 0.56
PDGFBP01127 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFBP01127 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFBP01127 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFBP01127 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFBP01127 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFBP01127 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDGFBP01127 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.54■□□□□ 0.56
PDGFBP01127 Z82202.1-201ENST00000623446 1880 ntBASIC18.54■□□□□ 0.56
PDGFBP01127 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.54■□□□□ 0.56
PDGFBP01127 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDGFBP01127 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDGFBP01127 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDGFBP01127 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.54■□□□□ 0.56
PDGFBP01127 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.54■□□□□ 0.56
PDGFBP01127 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDGFBP01127 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.54■□□□□ 0.56
PDGFBP01127 AC106028.4-201ENST00000614509 607 ntBASIC18.54■□□□□ 0.56
PDGFBP01127 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.54■□□□□ 0.56
PDGFBP01127 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDGFBP01127 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDGFBP01127 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDGFBP01127 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.54■□□□□ 0.56
PDGFBP01127 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDGFBP01127 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDGFBP01127 TEX21P-204ENST00000641479 1693 ntBASIC18.54■□□□□ 0.56
PDGFBP01127 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFBP01127 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFBP01127 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFBP01127 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFBP01127 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFBP01127 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFBP01127 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.53■□□□□ 0.56
PDGFBP01127 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFBP01127 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.53■□□□□ 0.56
PDGFBP01127 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.53■□□□□ 0.56
PDGFBP01127 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
PDGFBP01127 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
PDGFBP01127 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFBP01127 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.53■□□□□ 0.56
PDGFBP01127 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFBP01127 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFBP01127 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms