Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
CPNE6O95741 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPNE6O95741 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.17■□□□□ 0.5
CPNE6O95741 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CPNE6O95741 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
CPNE6O95741 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPNE6O95741 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.17■□□□□ 0.5
CPNE6O95741 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.17■□□□□ 0.5
CPNE6O95741 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
CPNE6O95741 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.17■□□□□ 0.5
CPNE6O95741 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CPNE6O95741 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CPNE6O95741 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPNE6O95741 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE6O95741 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE6O95741 AP000997.3-201ENST00000623333 2250 ntBASIC18.16■□□□□ 0.5
CPNE6O95741 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CPNE6O95741 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE6O95741 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE6O95741 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE6O95741 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.16■□□□□ 0.5
CPNE6O95741 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE6O95741 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE6O95741 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE6O95741 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.16■□□□□ 0.5
CPNE6O95741 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE6O95741 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
CPNE6O95741 AL023284.2-201ENST00000405850 579 ntBASIC18.16■□□□□ 0.5
CPNE6O95741 MCCD1P1-208ENST00000445732 328 ntBASIC18.16■□□□□ 0.5
CPNE6O95741 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.16■□□□□ 0.5
CPNE6O95741 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.16■□□□□ 0.5
CPNE6O95741 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.16■□□□□ 0.5
CPNE6O95741 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE6O95741 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE6O95741 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.16■□□□□ 0.5
CPNE6O95741 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE6O95741 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.16■□□□□ 0.5
CPNE6O95741 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE6O95741 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE6O95741 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE6O95741 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE6O95741 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE6O95741 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.16■□□□□ 0.5
CPNE6O95741 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.16■□□□□ 0.5
CPNE6O95741 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.16■□□□□ 0.5
CPNE6O95741 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE6O95741 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE6O95741 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CPNE6O95741 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.16■□□□□ 0.5
CPNE6O95741 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.16■□□□□ 0.5
CPNE6O95741 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
CPNE6O95741 AC104581.1-202ENST00000635932 2618 ntBASIC18.16■□□□□ 0.5
CPNE6O95741 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE6O95741 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE6O95741 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPNE6O95741 KRT8P3-201ENST00000519669 1449 ntBASIC18.15■□□□□ 0.5
CPNE6O95741 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPNE6O95741 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPNE6O95741 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.15■□□□□ 0.5
CPNE6O95741 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.15■□□□□ 0.5
CPNE6O95741 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CPNE6O95741 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CPNE6O95741 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.15■□□□□ 0.5
CPNE6O95741 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPNE6O95741 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CPNE6O95741 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CPNE6O95741 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.15■□□□□ 0.5
CPNE6O95741 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.15■□□□□ 0.5
CPNE6O95741 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.15■□□□□ 0.5
CPNE6O95741 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.15■□□□□ 0.5
CPNE6O95741 MIR3180-5-201ENST00000583743 153 ntBASIC18.15■□□□□ 0.5
CPNE6O95741 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.15■□□□□ 0.5
CPNE6O95741 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CPNE6O95741 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.15■□□□□ 0.5
CPNE6O95741 AC036111.1-201ENST00000533973 1582 ntBASIC18.15■□□□□ 0.5
CPNE6O95741 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPNE6O95741 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.15■□□□□ 0.5
CPNE6O95741 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.15■□□□□ 0.5
CPNE6O95741 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.15■□□□□ 0.5
CPNE6O95741 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPNE6O95741 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.14■□□□□ 0.5
CPNE6O95741 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
CPNE6O95741 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
CPNE6O95741 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.14■□□□□ 0.5
CPNE6O95741 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPNE6O95741 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CPNE6O95741 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPNE6O95741 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.14■□□□□ 0.49
CPNE6O95741 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.14■□□□□ 0.49
CPNE6O95741 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPNE6O95741 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CPNE6O95741 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CPNE6O95741 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CPNE6O95741 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.14■□□□□ 0.49
CPNE6O95741 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CPNE6O95741 KRT18P48-201ENST00000434763 852 ntBASIC18.14■□□□□ 0.49
CPNE6O95741 RASA4DP-201ENST00000460726 1199 ntBASIC18.14■□□□□ 0.49
CPNE6O95741 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.14■□□□□ 0.49
CPNE6O95741 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CPNE6O95741 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms