Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.76■□□□□ 0.59
USP1O94782 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.76■□□□□ 0.59
USP1O94782 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP1O94782 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.76■□□□□ 0.59
USP1O94782 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.76■□□□□ 0.59
USP1O94782 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP1O94782 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.76■□□□□ 0.59
USP1O94782 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.76■□□□□ 0.59
USP1O94782 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP1O94782 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.75■□□□□ 0.59
USP1O94782 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.75■□□□□ 0.59
USP1O94782 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
USP1O94782 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP1O94782 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.75■□□□□ 0.59
USP1O94782 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
USP1O94782 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
USP1O94782 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
USP1O94782 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.75■□□□□ 0.59
USP1O94782 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP1O94782 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
USP1O94782 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.75■□□□□ 0.59
USP1O94782 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP1O94782 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.75■□□□□ 0.59
USP1O94782 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.75■□□□□ 0.59
USP1O94782 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.75■□□□□ 0.59
USP1O94782 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP1O94782 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP1O94782 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.75■□□□□ 0.59
USP1O94782 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.75■□□□□ 0.59
USP1O94782 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP1O94782 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP1O94782 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
USP1O94782 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USP1O94782 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP1O94782 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.74■□□□□ 0.59
USP1O94782 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
USP1O94782 AC008556.1-201ENST00000610908 2040 ntBASIC18.74■□□□□ 0.59
USP1O94782 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
USP1O94782 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.74■□□□□ 0.59
USP1O94782 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP1O94782 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP1O94782 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP1O94782 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP1O94782 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.74■□□□□ 0.59
USP1O94782 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.74■□□□□ 0.59
USP1O94782 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
USP1O94782 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.74■□□□□ 0.59
USP1O94782 RPS2P55-201ENST00000397318 883 ntBASIC18.74■□□□□ 0.59
USP1O94782 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.74■□□□□ 0.59
USP1O94782 AC107956.1-201ENST00000494359 873 ntBASIC18.74■□□□□ 0.59
USP1O94782 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.74■□□□□ 0.59
USP1O94782 AC008622.2-201ENST00000617006 1229 ntBASIC18.74■□□□□ 0.59
USP1O94782 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
USP1O94782 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
USP1O94782 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP1O94782 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP1O94782 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
USP1O94782 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP1O94782 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
USP1O94782 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
USP1O94782 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP1O94782 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP1O94782 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
USP1O94782 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
USP1O94782 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP1O94782 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP1O94782 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.73■□□□□ 0.59
USP1O94782 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP1O94782 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP1O94782 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP1O94782 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
USP1O94782 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP1O94782 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP1O94782 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
USP1O94782 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.73■□□□□ 0.59
USP1O94782 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.73■□□□□ 0.59
USP1O94782 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
USP1O94782 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP1O94782 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP1O94782 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP1O94782 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP1O94782 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USP1O94782 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
USP1O94782 AC012618.2-201ENST00000428058 849 ntBASIC18.73■□□□□ 0.59
USP1O94782 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USP1O94782 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.73■□□□□ 0.59
USP1O94782 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USP1O94782 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
USP1O94782 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USP1O94782 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.73■□□□□ 0.59
USP1O94782 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
USP1O94782 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
USP1O94782 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP1O94782 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USP1O94782 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP1O94782 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USP1O94782 AC020916.1-201ENST00000587762 1774 ntBASIC18.73■□□□□ 0.59
USP1O94782 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USP1O94782 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP1O94782 MYLKP1-201ENST00000509077 1580 ntBASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms