Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.77■□□□□ 0.6
PRAMEF11O60813 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.77■□□□□ 0.59
PRAMEF11O60813 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PRAMEF11O60813 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PRAMEF11O60813 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.77■□□□□ 0.59
PRAMEF11O60813 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
PRAMEF11O60813 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PRAMEF11O60813 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF11O60813 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PRAMEF11O60813 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.76■□□□□ 0.59
PRAMEF11O60813 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.76■□□□□ 0.59
PRAMEF11O60813 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF11O60813 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.76■□□□□ 0.59
PRAMEF11O60813 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF11O60813 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
PRAMEF11O60813 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF11O60813 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF11O60813 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.76■□□□□ 0.59
PRAMEF11O60813 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.76■□□□□ 0.59
PRAMEF11O60813 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PRAMEF11O60813 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.76■□□□□ 0.59
PRAMEF11O60813 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.76■□□□□ 0.59
PRAMEF11O60813 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF11O60813 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PRAMEF11O60813 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.76■□□□□ 0.59
PRAMEF11O60813 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF11O60813 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PRAMEF11O60813 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF11O60813 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF11O60813 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PRAMEF11O60813 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF11O60813 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF11O60813 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.76■□□□□ 0.59
PRAMEF11O60813 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF11O60813 AL020996.1-203ENST00000536896 2307 ntBASIC18.75■□□□□ 0.59
PRAMEF11O60813 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF11O60813 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF11O60813 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF11O60813 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.75■□□□□ 0.59
PRAMEF11O60813 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF11O60813 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF11O60813 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.75■□□□□ 0.59
PRAMEF11O60813 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF11O60813 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
PRAMEF11O60813 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF11O60813 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.75■□□□□ 0.59
PRAMEF11O60813 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF11O60813 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.75■□□□□ 0.59
PRAMEF11O60813 PVRIG2P-201ENST00000435460 978 ntBASIC18.75■□□□□ 0.59
PRAMEF11O60813 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.75■□□□□ 0.59
PRAMEF11O60813 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.75■□□□□ 0.59
PRAMEF11O60813 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.75■□□□□ 0.59
PRAMEF11O60813 HYMAI.1-201ENST00000620949 238 ntBASIC18.75■□□□□ 0.59
PRAMEF11O60813 AC079602.3-201ENST00000623931 403 ntBASIC18.75■□□□□ 0.59
PRAMEF11O60813 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF11O60813 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF11O60813 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF11O60813 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF11O60813 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF11O60813 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF11O60813 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF11O60813 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF11O60813 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF11O60813 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PRAMEF11O60813 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PRAMEF11O60813 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.74■□□□□ 0.59
PRAMEF11O60813 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF11O60813 AC099343.3-201ENST00000605834 2503 ntBASIC18.74■□□□□ 0.59
PRAMEF11O60813 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF11O60813 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF11O60813 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.74■□□□□ 0.59
PRAMEF11O60813 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PRAMEF11O60813 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.74■□□□□ 0.59
PRAMEF11O60813 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF11O60813 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.74■□□□□ 0.59
PRAMEF11O60813 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF11O60813 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.74■□□□□ 0.59
PRAMEF11O60813 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.74■□□□□ 0.59
PRAMEF11O60813 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.74■□□□□ 0.59
PRAMEF11O60813 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.74■□□□□ 0.59
PRAMEF11O60813 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF11O60813 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF11O60813 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PRAMEF11O60813 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF11O60813 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.74■□□□□ 0.59
PRAMEF11O60813 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PRAMEF11O60813 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF11O60813 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.74■□□□□ 0.59
PRAMEF11O60813 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF11O60813 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF11O60813 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF11O60813 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PRAMEF11O60813 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF11O60813 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PRAMEF11O60813 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.73■□□□□ 0.59
PRAMEF11O60813 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF11O60813 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PRAMEF11O60813 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF11O60813 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRAMEF11O60813 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms