Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HCN1O60741 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HCN1O60741 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HCN1O60741 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HCN1O60741 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.32■□□□□ 0.36
HCN1O60741 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
HCN1O60741 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HCN1O60741 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HCN1O60741 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
HCN1O60741 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HCN1O60741 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HCN1O60741 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HCN1O60741 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
HCN1O60741 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HCN1O60741 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
HCN1O60741 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HCN1O60741 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
HCN1O60741 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.32■□□□□ 0.36
HCN1O60741 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HCN1O60741 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HCN1O60741 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HCN1O60741 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HCN1O60741 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.31■□□□□ 0.36
HCN1O60741 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
HCN1O60741 AC092338.2-201ENST00000568827 1415 ntBASIC17.31■□□□□ 0.36
HCN1O60741 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.31■□□□□ 0.36
HCN1O60741 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HCN1O60741 AC135050.7-201ENST00000624508 2218 ntBASIC17.31■□□□□ 0.36
HCN1O60741 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HCN1O60741 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HCN1O60741 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.31■□□□□ 0.36
HCN1O60741 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HCN1O60741 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.31■□□□□ 0.36
HCN1O60741 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HCN1O60741 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HCN1O60741 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HCN1O60741 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HCN1O60741 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HCN1O60741 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HCN1O60741 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HCN1O60741 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
HCN1O60741 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.31■□□□□ 0.36
HCN1O60741 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.31■□□□□ 0.36
HCN1O60741 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HCN1O60741 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HCN1O60741 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HCN1O60741 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HCN1O60741 AC010203.1-204ENST00000548782 407 ntBASIC17.31■□□□□ 0.36
HCN1O60741 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.31■□□□□ 0.36
HCN1O60741 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
HCN1O60741 AL512604.3-201ENST00000569583 964 ntBASIC17.31■□□□□ 0.36
HCN1O60741 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.31■□□□□ 0.36
HCN1O60741 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.31■□□□□ 0.36
HCN1O60741 AL023803.3-201ENST00000615559 522 ntBASIC17.31■□□□□ 0.36
HCN1O60741 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
HCN1O60741 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HCN1O60741 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HCN1O60741 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HCN1O60741 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HCN1O60741 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
HCN1O60741 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HCN1O60741 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HCN1O60741 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HCN1O60741 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.31■□□□□ 0.36
HCN1O60741 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HCN1O60741 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.3■□□□□ 0.36
HCN1O60741 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HCN1O60741 PCDHB18P-201ENST00000524813 2368 ntBASIC17.3■□□□□ 0.36
HCN1O60741 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HCN1O60741 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.3■□□□□ 0.36
HCN1O60741 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.3■□□□□ 0.36
HCN1O60741 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HCN1O60741 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HCN1O60741 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HCN1O60741 INGX-201ENST00000359239 846 ntBASIC17.3■□□□□ 0.36
HCN1O60741 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.3■□□□□ 0.36
HCN1O60741 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.3■□□□□ 0.36
HCN1O60741 AC007663.1-201ENST00000438948 1240 ntBASIC17.3■□□□□ 0.36
HCN1O60741 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.3■□□□□ 0.36
HCN1O60741 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HCN1O60741 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.3■□□□□ 0.36
HCN1O60741 AL353719.1-201ENST00000566847 864 ntBASIC17.3■□□□□ 0.36
HCN1O60741 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HCN1O60741 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.3■□□□□ 0.36
HCN1O60741 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HCN1O60741 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HCN1O60741 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HCN1O60741 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HCN1O60741 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HCN1O60741 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.3■□□□□ 0.36
HCN1O60741 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HCN1O60741 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HCN1O60741 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HCN1O60741 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.3■□□□□ 0.36
HCN1O60741 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HCN1O60741 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.29■□□□□ 0.36
HCN1O60741 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HCN1O60741 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HCN1O60741 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HCN1O60741 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms