Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PHGDHO43175 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PHGDHO43175 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PHGDHO43175 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PHGDHO43175 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PHGDHO43175 AC067852.2-201ENST00000590513 2313 ntBASIC18.45■□□□□ 0.54
PHGDHO43175 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PHGDHO43175 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.45■□□□□ 0.54
PHGDHO43175 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.45■□□□□ 0.54
PHGDHO43175 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PHGDHO43175 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.45■□□□□ 0.54
PHGDHO43175 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PHGDHO43175 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PHGDHO43175 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PHGDHO43175 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.44■□□□□ 0.54
PHGDHO43175 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PHGDHO43175 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
PHGDHO43175 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PHGDHO43175 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PHGDHO43175 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PHGDHO43175 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PHGDHO43175 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PHGDHO43175 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PHGDHO43175 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.44■□□□□ 0.54
PHGDHO43175 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PHGDHO43175 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PHGDHO43175 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PHGDHO43175 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PHGDHO43175 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PHGDHO43175 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PHGDHO43175 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PHGDHO43175 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PHGDHO43175 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PHGDHO43175 AL109659.2-201ENST00000606809 1674 ntBASIC18.44■□□□□ 0.54
PHGDHO43175 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.44■□□□□ 0.54
PHGDHO43175 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
PHGDHO43175 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PHGDHO43175 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PHGDHO43175 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
PHGDHO43175 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PHGDHO43175 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.43■□□□□ 0.54
PHGDHO43175 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PHGDHO43175 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PHGDHO43175 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.43■□□□□ 0.54
PHGDHO43175 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PHGDHO43175 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PHGDHO43175 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PHGDHO43175 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PHGDHO43175 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.43■□□□□ 0.54
PHGDHO43175 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.43■□□□□ 0.54
PHGDHO43175 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.43■□□□□ 0.54
PHGDHO43175 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.43■□□□□ 0.54
PHGDHO43175 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.43■□□□□ 0.54
PHGDHO43175 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
PHGDHO43175 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
PHGDHO43175 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PHGDHO43175 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PHGDHO43175 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PHGDHO43175 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.43■□□□□ 0.54
PHGDHO43175 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
PHGDHO43175 MYLKP1-201ENST00000509077 1580 ntBASIC18.42■□□□□ 0.54
PHGDHO43175 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PHGDHO43175 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.42■□□□□ 0.54
PHGDHO43175 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PHGDHO43175 ESPNP-201ENST00000270691 2015 ntBASIC18.42■□□□□ 0.54
PHGDHO43175 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.42■□□□□ 0.54
PHGDHO43175 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PHGDHO43175 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.42■□□□□ 0.54
PHGDHO43175 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PHGDHO43175 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.42■□□□□ 0.54
PHGDHO43175 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.42■□□□□ 0.54
PHGDHO43175 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.42■□□□□ 0.54
PHGDHO43175 AC098590.1-201ENST00000468126 897 ntBASIC18.42■□□□□ 0.54
PHGDHO43175 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.42■□□□□ 0.54
PHGDHO43175 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.42■□□□□ 0.54
PHGDHO43175 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.42■□□□□ 0.54
PHGDHO43175 AC142381.4-202ENST00000563973 229 ntBASIC18.42■□□□□ 0.54
PHGDHO43175 SLC25A1P4-201ENST00000567977 778 ntBASIC18.42■□□□□ 0.54
PHGDHO43175 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PHGDHO43175 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PHGDHO43175 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PHGDHO43175 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PHGDHO43175 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PHGDHO43175 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PHGDHO43175 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PHGDHO43175 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.42■□□□□ 0.54
PHGDHO43175 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PHGDHO43175 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
PHGDHO43175 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PHGDHO43175 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PHGDHO43175 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
PHGDHO43175 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PHGDHO43175 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
PHGDHO43175 AC099343.3-201ENST00000605834 2503 ntBASIC18.42■□□□□ 0.54
PHGDHO43175 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.42■□□□□ 0.54
PHGDHO43175 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PHGDHO43175 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PHGDHO43175 AL135905.2-201ENST00000584934 1404 ntBASIC18.41■□□□□ 0.54
PHGDHO43175 GPAT2P1-201ENST00000444924 1672 ntBASIC18.41■□□□□ 0.54
PHGDHO43175 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms