Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLOCKO15516 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.59■□□□□ 0.41
CLOCKO15516 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.59■□□□□ 0.41
CLOCKO15516 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
CLOCKO15516 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.59■□□□□ 0.41
CLOCKO15516 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.59■□□□□ 0.41
CLOCKO15516 C1QBPP2-201ENST00000528754 825 ntBASIC17.59■□□□□ 0.41
CLOCKO15516 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CLOCKO15516 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.59■□□□□ 0.41
CLOCKO15516 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.59■□□□□ 0.41
CLOCKO15516 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.59■□□□□ 0.41
CLOCKO15516 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLOCKO15516 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.59■□□□□ 0.41
CLOCKO15516 AC134043.2-201ENST00000624206 2238 ntBASIC17.59■□□□□ 0.41
CLOCKO15516 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLOCKO15516 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.59■□□□□ 0.41
CLOCKO15516 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLOCKO15516 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLOCKO15516 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLOCKO15516 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.58■□□□□ 0.41
CLOCKO15516 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLOCKO15516 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.58■□□□□ 0.41
CLOCKO15516 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CLOCKO15516 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLOCKO15516 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLOCKO15516 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLOCKO15516 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLOCKO15516 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLOCKO15516 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLOCKO15516 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.58■□□□□ 0.4
CLOCKO15516 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.58■□□□□ 0.4
CLOCKO15516 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLOCKO15516 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.58■□□□□ 0.4
CLOCKO15516 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.58■□□□□ 0.4
CLOCKO15516 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.58■□□□□ 0.4
CLOCKO15516 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLOCKO15516 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CLOCKO15516 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLOCKO15516 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CLOCKO15516 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
CLOCKO15516 SIRPAP1-201ENST00000448467 1770 ntBASIC17.58■□□□□ 0.4
CLOCKO15516 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.58■□□□□ 0.4
CLOCKO15516 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.58■□□□□ 0.4
CLOCKO15516 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CLOCKO15516 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
CLOCKO15516 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLOCKO15516 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLOCKO15516 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLOCKO15516 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLOCKO15516 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLOCKO15516 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLOCKO15516 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.57■□□□□ 0.4
CLOCKO15516 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CLOCKO15516 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLOCKO15516 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLOCKO15516 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CLOCKO15516 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLOCKO15516 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLOCKO15516 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.57■□□□□ 0.4
CLOCKO15516 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CLOCKO15516 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.57■□□□□ 0.4
CLOCKO15516 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.57■□□□□ 0.4
CLOCKO15516 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CLOCKO15516 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLOCKO15516 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLOCKO15516 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLOCKO15516 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLOCKO15516 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLOCKO15516 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLOCKO15516 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CLOCKO15516 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLOCKO15516 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.57■□□□□ 0.4
CLOCKO15516 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.57■□□□□ 0.4
CLOCKO15516 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.57■□□□□ 0.4
CLOCKO15516 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLOCKO15516 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLOCKO15516 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLOCKO15516 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLOCKO15516 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.56■□□□□ 0.4
CLOCKO15516 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLOCKO15516 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CLOCKO15516 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLOCKO15516 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CLOCKO15516 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLOCKO15516 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLOCKO15516 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CLOCKO15516 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLOCKO15516 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CLOCKO15516 RPS2P4-201ENST00000476944 856 ntBASIC17.56■□□□□ 0.4
CLOCKO15516 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLOCKO15516 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.56■□□□□ 0.4
CLOCKO15516 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.56■□□□□ 0.4
CLOCKO15516 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.56■□□□□ 0.4
CLOCKO15516 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.56■□□□□ 0.4
CLOCKO15516 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.56■□□□□ 0.4
CLOCKO15516 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.56■□□□□ 0.4
CLOCKO15516 AL359736.2-201ENST00000621992 437 ntBASIC17.56■□□□□ 0.4
CLOCKO15516 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.56■□□□□ 0.4
CLOCKO15516 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLOCKO15516 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms