Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP3D1O14617 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.33■□□□□ 0.37
AP3D1O14617 HEIH-201ENST00000623091 1652 ntBASIC17.33■□□□□ 0.37
AP3D1O14617 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP3D1O14617 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.33■□□□□ 0.37
AP3D1O14617 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP3D1O14617 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.33■□□□□ 0.36
AP3D1O14617 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP3D1O14617 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP3D1O14617 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP3D1O14617 RPS2P55-201ENST00000397318 883 ntBASIC17.33■□□□□ 0.36
AP3D1O14617 B3GAT3P1-201ENST00000471720 806 ntBASIC17.33■□□□□ 0.36
AP3D1O14617 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.33■□□□□ 0.36
AP3D1O14617 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
AP3D1O14617 AC107956.1-201ENST00000494359 873 ntBASIC17.33■□□□□ 0.36
AP3D1O14617 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
AP3D1O14617 PRSS44-201ENST00000515154 1146 ntBASIC17.33■□□□□ 0.36
AP3D1O14617 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.33■□□□□ 0.36
AP3D1O14617 MIR6786-201ENST00000616843 113 ntBASIC17.33■□□□□ 0.36
AP3D1O14617 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP3D1O14617 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP3D1O14617 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP3D1O14617 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP3D1O14617 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP3D1O14617 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
AP3D1O14617 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.33■□□□□ 0.36
AP3D1O14617 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP3D1O14617 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
AP3D1O14617 AC139713.2-201ENST00000641328 2723 ntBASIC17.33■□□□□ 0.36
AP3D1O14617 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP3D1O14617 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
AP3D1O14617 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP3D1O14617 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP3D1O14617 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3D1O14617 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.32■□□□□ 0.36
AP3D1O14617 AL135905.2-201ENST00000584934 1404 ntBASIC17.32■□□□□ 0.36
AP3D1O14617 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.32■□□□□ 0.36
AP3D1O14617 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.32■□□□□ 0.36
AP3D1O14617 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP3D1O14617 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.32■□□□□ 0.36
AP3D1O14617 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.32■□□□□ 0.36
AP3D1O14617 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
AP3D1O14617 MESTP1-201ENST00000404287 994 ntBASIC17.32■□□□□ 0.36
AP3D1O14617 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.32■□□□□ 0.36
AP3D1O14617 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP3D1O14617 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.32■□□□□ 0.36
AP3D1O14617 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
AP3D1O14617 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.32■□□□□ 0.36
AP3D1O14617 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.32■□□□□ 0.36
AP3D1O14617 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3D1O14617 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP3D1O14617 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.32■□□□□ 0.36
AP3D1O14617 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
AP3D1O14617 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3D1O14617 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.32■□□□□ 0.36
AP3D1O14617 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.32■□□□□ 0.36
AP3D1O14617 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3D1O14617 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.32■□□□□ 0.36
AP3D1O14617 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3D1O14617 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3D1O14617 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
AP3D1O14617 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3D1O14617 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
AP3D1O14617 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
AP3D1O14617 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.31■□□□□ 0.36
AP3D1O14617 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.31■□□□□ 0.36
AP3D1O14617 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3D1O14617 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
AP3D1O14617 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.31■□□□□ 0.36
AP3D1O14617 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
AP3D1O14617 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3D1O14617 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3D1O14617 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.31■□□□□ 0.36
AP3D1O14617 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.31■□□□□ 0.36
AP3D1O14617 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
AP3D1O14617 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.31■□□□□ 0.36
AP3D1O14617 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
AP3D1O14617 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3D1O14617 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.31■□□□□ 0.36
AP3D1O14617 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.31■□□□□ 0.36
AP3D1O14617 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
AP3D1O14617 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.31■□□□□ 0.36
AP3D1O14617 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.31■□□□□ 0.36
AP3D1O14617 AC130371.2-201ENST00000619443 611 ntBASIC17.31■□□□□ 0.36
AP3D1O14617 AC113410.3-201ENST00000623366 203 ntBASIC17.31■□□□□ 0.36
AP3D1O14617 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.31■□□□□ 0.36
AP3D1O14617 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3D1O14617 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.31■□□□□ 0.36
AP3D1O14617 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3D1O14617 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3D1O14617 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3D1O14617 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3D1O14617 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.31■□□□□ 0.36
AP3D1O14617 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
AP3D1O14617 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3D1O14617 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3D1O14617 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP3D1O14617 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3D1O14617 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP3D1O14617 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms