Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.83■□□□□ 0.76
SMIM28A0A1B0GU29 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.82■□□□□ 0.76
SMIM28A0A1B0GU29 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SMIM28A0A1B0GU29 ANO7L1-203ENST00000602586 1720 ntBASIC19.82■□□□□ 0.76
SMIM28A0A1B0GU29 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMIM28A0A1B0GU29 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.82■□□□□ 0.76
SMIM28A0A1B0GU29 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMIM28A0A1B0GU29 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMIM28A0A1B0GU29 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMIM28A0A1B0GU29 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMIM28A0A1B0GU29 SDHAP2-201ENST00000455183 2001 ntBASIC19.82■□□□□ 0.76
SMIM28A0A1B0GU29 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMIM28A0A1B0GU29 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SMIM28A0A1B0GU29 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMIM28A0A1B0GU29 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMIM28A0A1B0GU29 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMIM28A0A1B0GU29 IGHGP-201ENST00000390555 1178 ntBASIC19.82■□□□□ 0.76
SMIM28A0A1B0GU29 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMIM28A0A1B0GU29 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.82■□□□□ 0.76
SMIM28A0A1B0GU29 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.82■□□□□ 0.76
SMIM28A0A1B0GU29 CHCHD2P8-201ENST00000429873 447 ntBASIC19.82■□□□□ 0.76
SMIM28A0A1B0GU29 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.82■□□□□ 0.76
SMIM28A0A1B0GU29 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SMIM28A0A1B0GU29 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMIM28A0A1B0GU29 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SMIM28A0A1B0GU29 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMIM28A0A1B0GU29 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.82■□□□□ 0.76
SMIM28A0A1B0GU29 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMIM28A0A1B0GU29 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
SMIM28A0A1B0GU29 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMIM28A0A1B0GU29 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
SMIM28A0A1B0GU29 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMIM28A0A1B0GU29 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMIM28A0A1B0GU29 KRT89P-201ENST00000620027 1478 ntBASIC19.81■□□□□ 0.76
SMIM28A0A1B0GU29 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.81■□□□□ 0.76
SMIM28A0A1B0GU29 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMIM28A0A1B0GU29 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMIM28A0A1B0GU29 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.81■□□□□ 0.76
SMIM28A0A1B0GU29 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.81■□□□□ 0.76
SMIM28A0A1B0GU29 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SMIM28A0A1B0GU29 AC092329.2-201ENST00000598402 547 ntBASIC19.81■□□□□ 0.76
SMIM28A0A1B0GU29 GPR32P1-201ENST00000601788 811 ntBASIC19.81■□□□□ 0.76
SMIM28A0A1B0GU29 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.81■□□□□ 0.76
SMIM28A0A1B0GU29 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMIM28A0A1B0GU29 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMIM28A0A1B0GU29 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMIM28A0A1B0GU29 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.81■□□□□ 0.76
SMIM28A0A1B0GU29 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.81■□□□□ 0.76
SMIM28A0A1B0GU29 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.81■□□□□ 0.76
SMIM28A0A1B0GU29 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMIM28A0A1B0GU29 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.8■□□□□ 0.76
SMIM28A0A1B0GU29 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMIM28A0A1B0GU29 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMIM28A0A1B0GU29 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SMIM28A0A1B0GU29 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SMIM28A0A1B0GU29 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMIM28A0A1B0GU29 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMIM28A0A1B0GU29 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMIM28A0A1B0GU29 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMIM28A0A1B0GU29 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMIM28A0A1B0GU29 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.8■□□□□ 0.76
SMIM28A0A1B0GU29 AP002414.4-201ENST00000589764 1148 ntBASIC19.8■□□□□ 0.76
SMIM28A0A1B0GU29 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.8■□□□□ 0.76
SMIM28A0A1B0GU29 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMIM28A0A1B0GU29 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.8■□□□□ 0.76
SMIM28A0A1B0GU29 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMIM28A0A1B0GU29 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMIM28A0A1B0GU29 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.79■□□□□ 0.76
SMIM28A0A1B0GU29 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SMIM28A0A1B0GU29 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SMIM28A0A1B0GU29 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMIM28A0A1B0GU29 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SMIM28A0A1B0GU29 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMIM28A0A1B0GU29 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMIM28A0A1B0GU29 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMIM28A0A1B0GU29 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SMIM28A0A1B0GU29 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMIM28A0A1B0GU29 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.79■□□□□ 0.76
SMIM28A0A1B0GU29 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.79■□□□□ 0.76
SMIM28A0A1B0GU29 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.79■□□□□ 0.76
SMIM28A0A1B0GU29 CLEC4GP1-201ENST00000596555 870 ntBASIC19.79■□□□□ 0.76
SMIM28A0A1B0GU29 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMIM28A0A1B0GU29 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMIM28A0A1B0GU29 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMIM28A0A1B0GU29 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SMIM28A0A1B0GU29 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMIM28A0A1B0GU29 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMIM28A0A1B0GU29 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SMIM28A0A1B0GU29 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMIM28A0A1B0GU29 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SMIM28A0A1B0GU29 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMIM28A0A1B0GU29 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.78■□□□□ 0.76
SMIM28A0A1B0GU29 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.78■□□□□ 0.76
SMIM28A0A1B0GU29 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SMIM28A0A1B0GU29 AL031598.1-201ENST00000561511 1773 ntBASIC19.78■□□□□ 0.76
SMIM28A0A1B0GU29 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SMIM28A0A1B0GU29 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.78■□□□□ 0.76
SMIM28A0A1B0GU29 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SMIM28A0A1B0GU29 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMIM28A0A1B0GU29 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms