Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 CALM3-202ENST00000391918 702 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 MAX-217ENST00000557277 728 ntTSL 3 BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 EMC9-206ENST00000560403 872 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 AC098934.4-201ENST00000564127 592 ntBASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 AC083880.1-201ENST00000608266 535 ntBASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 INO80E-214ENST00000620599 515 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-6A0A0B4J262 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 MOK-225ENST00000522867 1883 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 RNA5SP413-201ENST00000516373 109 ntBASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 AC006557.6-201ENST00000623071 864 ntBASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 AC006333.2-201ENST00000607957 2099 ntBASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 TPR-209ENST00000613151 2478 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TRAV8-6A0A0B4J262 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-6A0A0B4J262 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
TRAV8-6A0A0B4J262 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-6A0A0B4J262 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-6A0A0B4J262 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-6A0A0B4J262 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-6A0A0B4J262 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-6A0A0B4J262 PHGDH-210ENST00000641115 1638 ntBASIC13.65□□□□□ -0.22
TRAV8-6A0A0B4J262 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-6A0A0B4J262 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-6A0A0B4J262 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-6A0A0B4J262 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-6A0A0B4J262 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-6A0A0B4J262 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-6A0A0B4J262 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-6A0A0B4J262 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-6A0A0B4J262 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-6A0A0B4J262 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-6A0A0B4J262 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TRAV8-6A0A0B4J262 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-6A0A0B4J262 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-6A0A0B4J262 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC13.65□□□□□ -0.22
TRAV8-6A0A0B4J262 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC13.65□□□□□ -0.22
TRAV8-6A0A0B4J262 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC13.65□□□□□ -0.22
TRAV8-6A0A0B4J262 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-6A0A0B4J262 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC13.65□□□□□ -0.22
TRAV8-6A0A0B4J262 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC13.65□□□□□ -0.22
TRAV8-6A0A0B4J262 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-6A0A0B4J262 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TRAV8-6A0A0B4J262 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC13.65□□□□□ -0.22
TRAV8-6A0A0B4J262 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms