Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBP1Q9NZI7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UBP1Q9NZI7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.89■□□□□ 0.61
UBP1Q9NZI7 ECEL1P2-202ENST00000465689 757 ntBASIC18.89■□□□□ 0.61
UBP1Q9NZI7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UBP1Q9NZI7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.89■□□□□ 0.61
UBP1Q9NZI7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
UBP1Q9NZI7 MIR3180-5-201ENST00000583743 153 ntBASIC18.89■□□□□ 0.61
UBP1Q9NZI7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.89■□□□□ 0.61
UBP1Q9NZI7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UBP1Q9NZI7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBP1Q9NZI7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UBP1Q9NZI7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
UBP1Q9NZI7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
UBP1Q9NZI7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
UBP1Q9NZI7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.89■□□□□ 0.61
UBP1Q9NZI7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
UBP1Q9NZI7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
UBP1Q9NZI7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBP1Q9NZI7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
UBP1Q9NZI7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBP1Q9NZI7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
UBP1Q9NZI7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBP1Q9NZI7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.88■□□□□ 0.61
UBP1Q9NZI7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.88■□□□□ 0.61
UBP1Q9NZI7 EGLN1P1-201ENST00000531623 762 ntBASIC18.88■□□□□ 0.61
UBP1Q9NZI7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.88■□□□□ 0.61
UBP1Q9NZI7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.88■□□□□ 0.61
UBP1Q9NZI7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.88■□□□□ 0.61
UBP1Q9NZI7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBP1Q9NZI7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
UBP1Q9NZI7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.88■□□□□ 0.61
UBP1Q9NZI7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBP1Q9NZI7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
UBP1Q9NZI7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
UBP1Q9NZI7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
UBP1Q9NZI7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBP1Q9NZI7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBP1Q9NZI7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBP1Q9NZI7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
UBP1Q9NZI7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBP1Q9NZI7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.88■□□□□ 0.61
UBP1Q9NZI7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBP1Q9NZI7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBP1Q9NZI7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.88■□□□□ 0.61
UBP1Q9NZI7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBP1Q9NZI7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBP1Q9NZI7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UBP1Q9NZI7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBP1Q9NZI7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UBP1Q9NZI7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
UBP1Q9NZI7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
UBP1Q9NZI7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBP1Q9NZI7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBP1Q9NZI7 KRT8P45-201ENST00000414328 1447 ntBASIC18.87■□□□□ 0.61
UBP1Q9NZI7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBP1Q9NZI7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.87■□□□□ 0.61
UBP1Q9NZI7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBP1Q9NZI7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.87■□□□□ 0.61
UBP1Q9NZI7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.87■□□□□ 0.61
UBP1Q9NZI7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UBP1Q9NZI7 AC112777.1-201ENST00000540175 1423 ntBASIC18.87■□□□□ 0.61
UBP1Q9NZI7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UBP1Q9NZI7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.87■□□□□ 0.61
UBP1Q9NZI7 CR769767.2-201ENST00000622735 460 ntBASIC18.87■□□□□ 0.61
UBP1Q9NZI7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.87■□□□□ 0.61
UBP1Q9NZI7 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBP1Q9NZI7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UBP1Q9NZI7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UBP1Q9NZI7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
UBP1Q9NZI7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.86■□□□□ 0.61
UBP1Q9NZI7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBP1Q9NZI7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UBP1Q9NZI7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBP1Q9NZI7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UBP1Q9NZI7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.86■□□□□ 0.61
UBP1Q9NZI7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBP1Q9NZI7 HCG11-201ENST00000411553 5696 ntBASIC18.86■□□□□ 0.61
UBP1Q9NZI7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBP1Q9NZI7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
UBP1Q9NZI7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
UBP1Q9NZI7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.86■□□□□ 0.61
UBP1Q9NZI7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
UBP1Q9NZI7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
UBP1Q9NZI7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UBP1Q9NZI7 AC087499.1-201ENST00000418141 1075 ntBASIC18.86■□□□□ 0.61
UBP1Q9NZI7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.86■□□□□ 0.61
UBP1Q9NZI7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.86■□□□□ 0.61
UBP1Q9NZI7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.86■□□□□ 0.61
UBP1Q9NZI7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBP1Q9NZI7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
UBP1Q9NZI7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBP1Q9NZI7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UBP1Q9NZI7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBP1Q9NZI7 AC073592.3-201ENST00000625118 1834 ntBASIC18.86■□□□□ 0.61
UBP1Q9NZI7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBP1Q9NZI7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBP1Q9NZI7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBP1Q9NZI7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBP1Q9NZI7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms