Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
POLR2J3Q9H1A7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
POLR2J3Q9H1A7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
POLR2J3Q9H1A7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
POLR2J3Q9H1A7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
POLR2J3Q9H1A7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
POLR2J3Q9H1A7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.17■□□□□ 0.34
POLR2J3Q9H1A7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
POLR2J3Q9H1A7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
POLR2J3Q9H1A7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
POLR2J3Q9H1A7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.17■□□□□ 0.34
POLR2J3Q9H1A7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
POLR2J3Q9H1A7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
POLR2J3Q9H1A7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.17■□□□□ 0.34
POLR2J3Q9H1A7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
POLR2J3Q9H1A7 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
POLR2J3Q9H1A7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.17■□□□□ 0.34
POLR2J3Q9H1A7 RPS2P4-201ENST00000476944 856 ntBASIC17.17■□□□□ 0.34
POLR2J3Q9H1A7 RARRES2P10-201ENST00000564312 460 ntBASIC17.17■□□□□ 0.34
POLR2J3Q9H1A7 CKBP1-201ENST00000565489 1086 ntBASIC17.17■□□□□ 0.34
POLR2J3Q9H1A7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.17■□□□□ 0.34
POLR2J3Q9H1A7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
POLR2J3Q9H1A7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.17■□□□□ 0.34
POLR2J3Q9H1A7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
POLR2J3Q9H1A7 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
POLR2J3Q9H1A7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
POLR2J3Q9H1A7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
POLR2J3Q9H1A7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
POLR2J3Q9H1A7 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
POLR2J3Q9H1A7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
POLR2J3Q9H1A7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLR2J3Q9H1A7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLR2J3Q9H1A7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
POLR2J3Q9H1A7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLR2J3Q9H1A7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLR2J3Q9H1A7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.16■□□□□ 0.34
POLR2J3Q9H1A7 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLR2J3Q9H1A7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLR2J3Q9H1A7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLR2J3Q9H1A7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLR2J3Q9H1A7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLR2J3Q9H1A7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
POLR2J3Q9H1A7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
POLR2J3Q9H1A7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.16■□□□□ 0.34
POLR2J3Q9H1A7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLR2J3Q9H1A7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
POLR2J3Q9H1A7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
POLR2J3Q9H1A7 AC006058.3-201ENST00000606217 1069 ntBASIC17.16■□□□□ 0.34
POLR2J3Q9H1A7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLR2J3Q9H1A7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLR2J3Q9H1A7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLR2J3Q9H1A7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLR2J3Q9H1A7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLR2J3Q9H1A7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
POLR2J3Q9H1A7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.16■□□□□ 0.34
POLR2J3Q9H1A7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
POLR2J3Q9H1A7 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
POLR2J3Q9H1A7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
POLR2J3Q9H1A7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
POLR2J3Q9H1A7 AC067852.2-201ENST00000590513 2313 ntBASIC17.15■□□□□ 0.34
POLR2J3Q9H1A7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
POLR2J3Q9H1A7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
POLR2J3Q9H1A7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
POLR2J3Q9H1A7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
POLR2J3Q9H1A7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.15■□□□□ 0.34
POLR2J3Q9H1A7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
POLR2J3Q9H1A7 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
POLR2J3Q9H1A7 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
POLR2J3Q9H1A7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
POLR2J3Q9H1A7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
POLR2J3Q9H1A7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
POLR2J3Q9H1A7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
POLR2J3Q9H1A7 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.15■□□□□ 0.34
POLR2J3Q9H1A7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
POLR2J3Q9H1A7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.15■□□□□ 0.34
POLR2J3Q9H1A7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.15■□□□□ 0.34
POLR2J3Q9H1A7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.15■□□□□ 0.34
POLR2J3Q9H1A7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
POLR2J3Q9H1A7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.15■□□□□ 0.34
POLR2J3Q9H1A7 AC073195.1-201ENST00000607241 877 ntBASIC17.15■□□□□ 0.34
POLR2J3Q9H1A7 AC011298.2-201ENST00000617989 482 ntBASIC17.15■□□□□ 0.34
POLR2J3Q9H1A7 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.15■□□□□ 0.34
POLR2J3Q9H1A7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.15■□□□□ 0.34
POLR2J3Q9H1A7 AP000997.3-201ENST00000623333 2250 ntBASIC17.15■□□□□ 0.34
POLR2J3Q9H1A7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
POLR2J3Q9H1A7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.15■□□□□ 0.34
POLR2J3Q9H1A7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
POLR2J3Q9H1A7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.15■□□□□ 0.34
POLR2J3Q9H1A7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
POLR2J3Q9H1A7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
POLR2J3Q9H1A7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
POLR2J3Q9H1A7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.15■□□□□ 0.34
POLR2J3Q9H1A7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
POLR2J3Q9H1A7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
POLR2J3Q9H1A7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLR2J3Q9H1A7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.14■□□□□ 0.33
POLR2J3Q9H1A7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
POLR2J3Q9H1A7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
POLR2J3Q9H1A7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLR2J3Q9H1A7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms