Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 AL109923.1-201ENST00000618799 583 ntBASIC19.35■□□□□ 0.69
DDX47Q9H0S4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
DDX47Q9H0S4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
DDX47Q9H0S4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DDX47Q9H0S4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.35■□□□□ 0.69
DDX47Q9H0S4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DDX47Q9H0S4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX47Q9H0S4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX47Q9H0S4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
DDX47Q9H0S4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX47Q9H0S4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX47Q9H0S4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
DDX47Q9H0S4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX47Q9H0S4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.34■□□□□ 0.69
DDX47Q9H0S4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX47Q9H0S4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX47Q9H0S4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
DDX47Q9H0S4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX47Q9H0S4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.34■□□□□ 0.69
DDX47Q9H0S4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.34■□□□□ 0.69
DDX47Q9H0S4 MTDHP1-201ENST00000605323 784 ntBASIC19.34■□□□□ 0.69
DDX47Q9H0S4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.34■□□□□ 0.69
DDX47Q9H0S4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
DDX47Q9H0S4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX47Q9H0S4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX47Q9H0S4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX47Q9H0S4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.34■□□□□ 0.69
DDX47Q9H0S4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
DDX47Q9H0S4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
DDX47Q9H0S4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX47Q9H0S4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
DDX47Q9H0S4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.33■□□□□ 0.69
DDX47Q9H0S4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
DDX47Q9H0S4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
DDX47Q9H0S4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
DDX47Q9H0S4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.33■□□□□ 0.69
DDX47Q9H0S4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
DDX47Q9H0S4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
DDX47Q9H0S4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.33■□□□□ 0.68
DDX47Q9H0S4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DDX47Q9H0S4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.33■□□□□ 0.68
DDX47Q9H0S4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
DDX47Q9H0S4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.33■□□□□ 0.68
DDX47Q9H0S4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.33■□□□□ 0.68
DDX47Q9H0S4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
DDX47Q9H0S4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
DDX47Q9H0S4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.33■□□□□ 0.68
DDX47Q9H0S4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.33■□□□□ 0.68
DDX47Q9H0S4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX47Q9H0S4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
DDX47Q9H0S4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.32■□□□□ 0.68
DDX47Q9H0S4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX47Q9H0S4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX47Q9H0S4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX47Q9H0S4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.32■□□□□ 0.68
DDX47Q9H0S4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX47Q9H0S4 RCC2P3-201ENST00000418112 1537 ntBASIC19.32■□□□□ 0.68
DDX47Q9H0S4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
DDX47Q9H0S4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
DDX47Q9H0S4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX47Q9H0S4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX47Q9H0S4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX47Q9H0S4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
DDX47Q9H0S4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX47Q9H0S4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.32■□□□□ 0.68
DDX47Q9H0S4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.32■□□□□ 0.68
DDX47Q9H0S4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX47Q9H0S4 PRSS44-201ENST00000515154 1146 ntBASIC19.32■□□□□ 0.68
DDX47Q9H0S4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
DDX47Q9H0S4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX47Q9H0S4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.32■□□□□ 0.68
DDX47Q9H0S4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
DDX47Q9H0S4 AC233263.1-201ENST00000578059 224 ntBASIC19.32■□□□□ 0.68
DDX47Q9H0S4 AC069544.1-201ENST00000609399 999 ntBASIC19.32■□□□□ 0.68
DDX47Q9H0S4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.32■□□□□ 0.68
DDX47Q9H0S4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.32■□□□□ 0.68
DDX47Q9H0S4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX47Q9H0S4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX47Q9H0S4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX47Q9H0S4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
DDX47Q9H0S4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
DDX47Q9H0S4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.32■□□□□ 0.68
DDX47Q9H0S4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.32■□□□□ 0.68
DDX47Q9H0S4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
DDX47Q9H0S4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.32■□□□□ 0.68
DDX47Q9H0S4 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
DDX47Q9H0S4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX47Q9H0S4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
DDX47Q9H0S4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX47Q9H0S4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
DDX47Q9H0S4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
DDX47Q9H0S4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX47Q9H0S4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
DDX47Q9H0S4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
DDX47Q9H0S4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.31■□□□□ 0.68
DDX47Q9H0S4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
DDX47Q9H0S4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.31■□□□□ 0.68
DDX47Q9H0S4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.31■□□□□ 0.68
DDX47Q9H0S4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.31■□□□□ 0.68
DDX47Q9H0S4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms